RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 LRRC15Q8TF66 581 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 KIFAP3Q92845 792 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 HINFPQ9BQA5 517 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 DNAJC25Q9H1X3 360 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 TMEM134Q9H6X4 195 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 ZSCAN32Q9NX65 697 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 PCDHB6Q9Y5E3 794 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 PCDHGA2Q9Y5H1 932 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 PHLPP2Q6ZVD8 1323 aa15.65■□□□□ 0.1
CPSF1-201ENST00000526271 SFI1A8K8P3 1242 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 K7ERI5 159 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 MUTP22033 750 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 SCN1AP35498 2009 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 ARPP19P56211 112 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 ADCY1Q08828 1119 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 ZNF568Q3ZCX4 644 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 RINT1Q6NUQ1 792 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 BEST2Q8NFU1 509 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 NUP210Q8TEM1 1887 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-201ENST00000526271 SUSD3Q96L08 255 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 KIF2CQ99661 725 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 MKNK1Q9BUB5 465 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 CHRDQ9H2X0 955 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 FOXP1Q9H334 677 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-201ENST00000526271 CYP4F11Q9HBI6 524 aa15.64■□□□□ 0.09
CPSF1-201ENST00000526271 ZNF334Q9HCZ1 680 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-201ENST00000526271 RALGAPA1Q6GYQ0 2036 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 DENND4CQ5VZ89 1909 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 CCDC169A6NNP5 214 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 PPEF2O14830 753 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 SYN3O14994 580 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 OR4Q2P0C623 313 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 SPAG1Q07617 926 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 ORC2Q13416 577 aaPredicted RBP15.63■□□□□ 0.09
CPSF1-201ENST00000526271 STXBP5Q5T5C0 1151 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 RNF19BQ6ZMZ0 732 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 TMC8Q8IU68 726 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 ERMNQ8TAM6 284 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 SHKBP1Q8TBC3 707 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 DDX12PQ92771 950 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 DNASE1L2Q92874 299 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 IFT74Q96LB3 600 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 CNTNAP3BQ96NU0 1288 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 PNMA5Q96PV4 448 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 CNTNAP3Q9BZ76 1288 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 LRWD1Q9UFC0 647 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 NDRG2Q9UN36 371 aaKnown RBP15.63■□□□□ 0.09
CPSF1-201ENST00000526271 EML5Q05BV3 1969 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 ATG2BQ96BY7 2078 aa15.63■□□□□ 0.09
CPSF1-201ENST00000526271 SLC16A4O15374 487 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 FAM189A1O60320 539 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 MICAL2O94851 1124 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 LRG1P02750 347 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 MCF2P10911 925 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 CHRNB1P11230 501 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 MAGEA9P43362 315 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 AARSP49588 968 aaKnown RBP eCLIP15.62■□□□□ 0.09
CPSF1-201ENST00000526271 GUCY2FP51841 1108 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 SATB1Q01826 763 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 TWF1Q12792 350 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 PTGDRQ13258 359 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 TRIM29Q14134 588 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 ZBTB6Q15916 424 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 MPZL3Q6UWV2 235 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 ZNF852Q6ZMS4 543 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 MAMSTRQ6ZN01 415 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 GPIHBP1Q8IV16 184 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 SNX29Q8TEQ0 813 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 TBC1D32Q96NH3 1257 aa15.62■□□□□ 0.09
CPSF1-201ENST00000526271 CCDC94Q9BW85 323 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-201ENST00000526271 MRPL4Q9BYD3 311 aaKnown RBP15.62■□□□□ 0.09
CPSF1-201ENST00000526271 TIMM13Q9Y5L4 95 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-201ENST00000526271 CFAP47Q6ZTR5 3102 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 OBSL1O75147 1896 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 PRRG1O14668 218 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 KRT37O76014 449 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 HARSP12081 509 aaKnown RBP15.61■□□□□ 0.09
CPSF1-201ENST00000526271 U2AF2P26368 475 aaKnown RBP eCLIP15.61■□□□□ 0.09
CPSF1-201ENST00000526271 GDI1P31150 447 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 SOX9P48436 509 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 SRSF5Q13243 272 aaKnown RBP15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TEAD2Q15562 447 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 LPAL2Q16609 132 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 CTXN3Q4LDR2 81 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 HAUS3Q68CZ6 603 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TXNDC11Q6PKC3 985 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TTC9BQ8N6N2 239 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TMEM161BQ8NDZ6 487 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 SMARCD2Q92925 531 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 ACAP3Q96P50 834 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TMEM209Q96SK2 561 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 NELL2Q99435 816 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 NTPCRQ9BSD7 190 aaKnown RBP15.61■□□□□ 0.09
CPSF1-201ENST00000526271 BRD9Q9H8M2 597 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TRPV4Q9HBA0 871 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 ZFP14Q9HCL3 533 aa15.61■□□□□ 0.09
CPSF1-201ENST00000526271 TRPV5Q9NQA5 729 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms