RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ATICP31939 592 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 MAGEA10P43363 369 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 NOP14P78316 857 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 APBA1Q02410 837 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 MYO1EQ12965 1108 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 PAN2Q504Q3 1202 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 KLHDC7AQ5VTJ3 777 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 LRRC52Q8N7C0 313 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 CXorf38Q8TB03 319 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 UROC1Q96N76 676 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 SIX2Q9NPC8 291 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 SLC4A7Q9Y6M7 1214 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 ANO9A1A5B4 782 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 PODXLO00592 558 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 PPEF2O14830 753 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 RFX1P22670 979 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 PNPLA4P41247 253 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 CLCNKBP51801 687 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 FIGNQ5HY92 759 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 SCARA3Q6AZY7 606 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 SPOPLQ6IQ16 392 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 CACNA2D4Q7Z3S7 1137 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 SLC9A7Q96T83 725 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 XYLT2Q9H1B5 865 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 GANQ9H2C0 597 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 DAAM1Q9Y4D1 1078 aa17.03■□□□□ 0.32
TSPAN4-213ENST00000524895 PIRO00625 290 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 EPHB6O15197 1021 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 NOL4O94818 638 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 DDHD2O94830 711 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 STAU1O95793 577 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 GYPCP04921 128 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 P4HA1P13674 534 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 UCHL3P15374 230 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 TAF6P49848 677 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 DSC1Q08554 894 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 CCDC173Q0VFZ6 552 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 SV2CQ496J9 727 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 ZNF667Q5HYK9 610 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 GJB7Q6PEY0 223 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 ZNF280BQ86YH2 543 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 CPLX3Q8WVH0 158 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 ELMO3Q96BJ8 720 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 YME1L1Q96TA2 773 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 ZBED2Q9BTP6 218 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 NIF3L1Q9GZT8 377 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 APOBEC3GQ9HC16 384 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 UBE2TQ9NPD8 197 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 CEP72Q9P209 647 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 IMPACTQ9P2X3 320 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 CACNG4Q9UBN1 327 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 FHOD1Q9Y613 1164 aa17.02■□□□□ 0.32
TSPAN4-213ENST00000524895 COL4A6Q14031 1691 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 TBXAS1P24557 533 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 TNNC1P63316 161 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 GCNT1Q02742 428 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 TBX2Q13207 712 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 RAPGEF1Q13905 1077 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 UPP1Q16831 310 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 WDR72Q3MJ13 1102 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 IQCEQ6IPM2 695 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 DPY19L2P1Q6NXN4 242 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 RRAGAQ7L523 313 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 COLGALT2Q8IYK4 626 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 CMTR2Q8IYT2 770 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 ZNF397Q8NF99 534 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 TATDN2Q93075 761 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 ZNF689Q96CS4 500 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 PDLIM2Q96JY6 352 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 FAM81BQ96LP2 452 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 TTYH3Q9C0H2 523 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 VRTNQ9H8Y1 702 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 NXF1Q9UBU9 619 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 DNAJC12Q9UKB3 198 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 NUB1Q9Y5A7 615 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 PTPRSQ13332 1948 aa17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 FNDC1Q4ZHG4 1894 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-213ENST00000524895 B4GALT3O60512 393 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 GJB5O95377 273 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 CASP14P31944 242 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 OR1G1P47890 313 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 MFAP3P55082 362 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 CUL2Q13617 745 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 BTG3Q14201 252 aaPredicted RBP17■□□□□ 0.31
TSPAN4-213ENST00000524895 SCARA5Q6ZMJ2 495 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 ENOSF1Q7L5Y1 443 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms