RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 MAGEF1Q9HAY2 307 aa19.42■□□□□ 0.7
TRAPPC9-211ENST00000521700 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
TRAPPC9-211ENST00000521700 MYO10Q9HD67 2058 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 TBC1D4O60343 1298 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 NFICP08651 508 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 CASP1P29466 404 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 KRT85P78386 507 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 POU5F1Q01860 360 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 CCDC149Q6ZUS6 474 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 ZDHHC14Q8IZN3 488 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 TDRD5Q8NAT2 981 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 ZSWIM2Q8NEG5 633 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 BEST2Q8NFU1 509 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 BLZF1Q9H2G9 400 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 ASB7Q9H672 318 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 TMEM206Q9H813 350 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 PIDD1Q9HB75 910 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 WDR6Q9NNW5 1121 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 DERAQ9Y315 318 aa19.41■□□□□ 0.7
TRAPPC9-211ENST00000521700 PPEF2O14830 753 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 C8AP07357 584 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 COL9A1P20849 921 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 GARTP22102 1010 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 ZXDAP98168 799 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 BECN1Q14457 450 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 TMEM132DQ14C87 1099 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 SLC8B1Q6J4K2 584 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 PLCD3Q8N3E9 789 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 SAAL1Q96ER3 474 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 CBWD1Q9BRT8 395 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 FAM213AQ9BRX8 229 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 SERTAD1Q9UHV2 236 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 PCDHB8Q9UN66 801 aa19.4■□□□□ 0.7
TRAPPC9-211ENST00000521700 TCHHQ07283 1943 aa19.39■□□□□ 0.7
TRAPPC9-211ENST00000521700 PRR33A8MZF0 331 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 H7C4K7 107 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 M0QZQ0 153 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 CMA1P23946 247 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 HOXD13P35453 343 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 AFMP43652 599 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 AARSP49588 968 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 ROR1Q01973 937 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 PTPN21Q16825 1174 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 LIN9Q5TKA1 542 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 C9orf57Q5W0N0 161 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 UNC13DQ70J99 1090 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 OTOP3Q7RTS5 596 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 APPL2Q8NEU8 664 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 ACSF2Q96CM8 615 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 PYM1Q9BRP8 204 aaKnown RBP19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 PCIF1Q9H4Z3 704 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 LIMD1Q9UGP4 676 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 C2CD2Q9Y426 696 aa19.39■□□□□ 0.69
TRAPPC9-211ENST00000521700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 ANO9A1A5B4 782 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 GOLGA8IPA6NC78 632 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 GOLGA8JA6NMD2 632 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 PIRO00625 290 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 CLUHO75153 1309 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 ABLIM3O94929 683 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 LDHAP00338 332 aaKnown RBP19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 HNRNPA1P09651 372 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 SLFN14P0C7P3 912 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 WNT7BP56706 349 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 EHHADHQ08426 723 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 CUL4BQ13620 913 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 UVSSAQ2YD98 709 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 CTXN3Q4LDR2 81 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 FAM26FQ5R3K3 315 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 PPM1LQ5SGD2 360 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 STXBP4Q6ZWJ1 553 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 EPM2AIP1Q7L775 607 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 EFCAB13Q8IY85 973 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 GRAMD1CQ8IYS0 662 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 ZNF461Q8TAF7 563 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 SLC7A14Q8TBB6 771 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 ZNF507Q8TCN5 953 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 ATP6V1DQ9Y5K8 247 aa19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 TIMM13Q9Y5L4 95 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC9-211ENST00000521700 TECTAO75443 2155 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 DOCK6Q96HP0 2047 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 WDR27A2RRH5 827 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 SPTLC1O15269 473 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 EIF3DO15371 548 aaKnown RBP eCLIP19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 ACTN4O43707 911 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 N4BP1O75113 896 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 OAZ2O95190 189 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 IL18RAPO95256 599 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 ASGR2P07307 311 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 PFKFB1P16118 471 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 HOXA9P31269 272 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 ARPP19P56211 112 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 LILRA4P59901 499 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 DSTYKQ6XUX3 929 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 TRIM67Q6ZTA4 783 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 CEP57L1Q8IYX8 460 aa19.37■□□□□ 0.69
TRAPPC9-211ENST00000521700 DPP3Q9NY33 737 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms