RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 KIAA0391O15091 583 aaKnown RBP26.74■■□□□ 1.87
PVT1-204ENST00000517525 EIF3DO15371 548 aaKnown RBP eCLIP26.74■■□□□ 1.873e-7■■■■□ 25.7
PVT1-204ENST00000517525 RFPL2O75678 378 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 LDHAP00338 332 aaKnown RBP26.74■■□□□ 1.87
PVT1-204ENST00000517525 SLFN14P0C7P3 912 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 SPATA31D3P0C874 917 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 OR1D2P34982 312 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 SPAG1Q07617 926 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 JADE1Q6IE81 842 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 RSPO2Q6UXX9 243 aaPredicted RBP26.74■■□□□ 1.87
PVT1-204ENST00000517525 SPATA31D4Q6ZUB0 917 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 CCDC149Q6ZUS6 474 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 UNC13DQ70J99 1090 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 GLYCTKQ8IVS8 523 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 APPL2Q8NEU8 664 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 BEST2Q8NFU1 509 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 EDAQ92838 391 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 SPATA32Q96LK8 384 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 IKZF4Q9H2S9 585 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 USP25Q9UHP3 1055 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 PCDHB8Q9UN66 801 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 PLXNA3P51805 1871 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 MTCL1Q9Y4B5 1905 aaKnown RBP26.73■■□□□ 1.87
PVT1-204ENST00000517525 C2CD4DB7Z1M9 353 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 IL18RAPO95256 599 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 ASIC1P78348 528 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 EPM2AIP1Q7L775 607 aaPredicted RBP26.73■■□□□ 1.87
PVT1-204ENST00000517525 OTOP3Q7RTS5 596 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 LRFN3Q9BTN0 628 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 OXCT2Q9BYC2 517 aaPredicted RBP26.73■■□□□ 1.87
PVT1-204ENST00000517525 SCAND2PQ9GZW5 306 aaPredicted RBP26.73■■□□□ 1.87
PVT1-204ENST00000517525 HPSEQ9Y251 543 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 CDY1Q9Y6F8 540 aa26.73■■□□□ 1.87
PVT1-204ENST00000517525 ANO9A1A5B4 782 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 ABLIM3O94929 683 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 MCM4P33991 863 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 TMEM132DQ14C87 1099 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 SYCP3Q8IZU3 236 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 TDRD5Q8NAT2 981 aaKnown RBP26.72■■□□□ 1.87
PVT1-204ENST00000517525 ZNF461Q8TAF7 563 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 ZNF507Q8TCN5 953 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 SMG7Q92540 1137 aaKnown RBP26.72■■□□□ 1.87
PVT1-204ENST00000517525 MAFFQ9ULX9 164 aa26.72■■□□□ 1.87
PVT1-204ENST00000517525 PRR33A8MZF0 331 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 PIRO00625 290 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 ACTN4O43707 911 aaKnown RBP26.71■■□□□ 1.87
PVT1-204ENST00000517525 PRPF6O94906 941 aaKnown RBP26.71■■□□□ 1.87
PVT1-204ENST00000517525 OAZ2O95190 189 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 NFICP08651 508 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 PTPN21Q16825 1174 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 FAM26FQ5R3K3 315 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 LIN9Q5TKA1 542 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 BRSK2Q8IWQ3 736 aa26.71■■□□□ 1.87
PVT1-204ENST00000517525 ACSF2Q96CM8 615 aaPredicted RBP26.71■■□□□ 1.87
PVT1-204ENST00000517525 UBE4BO95155 1302 aa26.7■■□□□ 1.87
PVT1-204ENST00000517525 EXTL3O43909 919 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 HOXD13P35453 343 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 SNRPFP62306 86 aaKnown RBP26.7■■□□□ 1.86
PVT1-204ENST00000517525 ZXDAP98168 799 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 C9orf57Q5W0N0 161 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 CEP57L1Q8IYX8 460 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 FAM212AQ96EL1 285 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 DENND4AQ7Z401 1863 aa26.7■■□□□ 1.86
PVT1-204ENST00000517525 CLUHO75153 1309 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 A0A1W2PQ27 194 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 A0A1W2PQ64 194 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 A0A1W2PQD8 194 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 MYL1P05976 194 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 C8AP07357 584 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 TYMPP19971 482 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 LILRA4P59901 499 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 ROR1Q01973 937 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 TPGS2Q68CL5 300 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 ZNF280DQ6N043 979 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 GLIS3Q8NEA6 775 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 CBWD1Q9BRT8 395 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 TSHZ2Q9NRE2 1034 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 FBXL5Q9UKA1 691 aa26.69■■□□□ 1.86
PVT1-204ENST00000517525 PFKFB1P16118 471 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 GUCY2FP51841 1108 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 BMT2Q1RMZ1 405 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 PPM1LQ5SGD2 360 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 HPS3Q969F9 1004 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 FAM213AQ9BRX8 229 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 SERTAD1Q9UHV2 236 aa26.68■■□□□ 1.86
PVT1-204ENST00000517525 ARHGEF37A1IGU5 675 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 ATF2P15336 505 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 CUL4BQ13620 913 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 CTXN3Q4LDR2 81 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 BMP8AQ7Z5Y6 402 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 EFCAB13Q8IY85 973 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 TCEAL8Q8IYN2 117 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 TMEM130Q8N3G9 435 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 PAGE5Q96GU1 130 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 CHAMP1Q96JM3 812 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 PIDD1Q9HB75 910 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 EPS15L1Q9UBC2 864 aa26.67■■□□□ 1.86
PVT1-204ENST00000517525 A0A1B0GVL5 298 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 WDR27A2RRH5 827 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 PPEF2O14830 753 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms