RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 PTPRHQ9HD43 1115 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 PIAS3Q9Y6X2 628 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 PDCD11Q14690 1871 aaKnown RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 F5P12259 2224 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 CCDC169A6NNP5 214 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 KRT37O76014 449 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
LMNA-223ENST00000515459 SPEM2Q0P670 501 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 ZNF174Q15697 407 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 LPAL2Q16609 132 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 ZNF280DQ6N043 979 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 HS6ST3Q8IZP7 471 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 LEMD2Q8NC56 503 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 ACAP3Q96P50 834 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 MRPL4Q9BYD3 311 aaKnown RBP17.25■□□□□ 0.35
LMNA-223ENST00000515459 MAFFQ9ULX9 164 aa17.25■□□□□ 0.35
LMNA-223ENST00000515459 ZNF263O14978 683 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 MYL4P12829 197 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 KCNE1P15382 129 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 CXCL12P48061 93 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 PEX3P56589 373 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 ECM1Q16610 540 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 PRR23BQ6ZRT6 265 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 MFSD6LQ8IWD5 586 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 ZSCAN18Q8TBC5 510 aaPredicted RBP17.24■□□□□ 0.35
LMNA-223ENST00000515459 SUSD3Q96L08 255 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 TCHPQ9BT92 498 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 TMEM134Q9H6X4 195 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 TRPV4Q9HBA0 871 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 ASAH2Q9NR71 780 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 CEP72Q9P209 647 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 CNTN3Q9P232 1028 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 AFF4Q9UHB7 1163 aaKnown RBP17.24■□□□□ 0.35
LMNA-223ENST00000515459 KIAA1024Q9UPX6 916 aa17.24■□□□□ 0.35
LMNA-223ENST00000515459 SPTBN2O15020 2390 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 EPG5Q9HCE0 2579 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 LRP3O75074 770 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 MOSPD3O75425 235 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 RETP07949 1114 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 MCF2P10911 925 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 CHRNB1P11230 501 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 GJA1P17302 382 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 CCNE1P24864 410 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 MCM4P33991 863 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 VIPR2P41587 438 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 NPTX2P47972 431 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 EPHA5P54756 1037 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 MLLT6P55198 1093 aaPredicted RBP17.23■□□□□ 0.35
LMNA-223ENST00000515459 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 TWF1Q12792 350 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 DMP1Q13316 513 aaPredicted RBP17.23■□□□□ 0.35
LMNA-223ENST00000515459 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 NETO1Q8TDF5 533 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 E2F7Q96AV8 911 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 C18orf25Q96B23 403 aaPredicted RBP17.23■□□□□ 0.35
LMNA-223ENST00000515459 TARS2Q9BW92 718 aaKnown RBP17.23■□□□□ 0.35
LMNA-223ENST00000515459 GPR88Q9GZN0 384 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.23■□□□□ 0.35
LMNA-223ENST00000515459 TPRP12270 2363 aaKnown RBP17.23■□□□□ 0.35
LMNA-223ENST00000515459 RALGAPA1Q6GYQ0 2036 aa17.23■□□□□ 0.35
LMNA-223ENST00000515459 KMT2BQ9UMN6 2715 aaPredicted RBP17.22■□□□□ 0.35
LMNA-223ENST00000515459 ADRB1P08588 477 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 CPB1P15086 417 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 FXR2P51116 673 aaKnown RBP eCLIP17.22■□□□□ 0.352e-9■■□□□ 14
LMNA-223ENST00000515459 SATB1Q01826 763 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 SIM2Q14190 667 aaPredicted RBP17.22■□□□□ 0.35
LMNA-223ENST00000515459 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 CSGALNACT1Q8TDX6 532 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 DDX12PQ92771 950 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 MSANTD3Q96H12 275 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 TBC1D32Q96NH3 1257 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 SLITRK6Q9H5Y7 841 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 KMT5AQ9NQR1 393 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
LMNA-223ENST00000515459 ARHGAP28Q9P2N2 729 aa17.22■□□□□ 0.35
LMNA-223ENST00000515459 RBM19Q9Y4C8 960 aaKnown RBP17.22■□□□□ 0.35
LMNA-223ENST00000515459 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.21■□□□□ 0.35
LMNA-223ENST00000515459 HEPACAM2A8MVW5 462 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 ARNTLO00327 626 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 ABLIM1O14639 778 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 SLC30A4O14863 429 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 PROZP22891 400 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
LMNA-223ENST00000515459 LRRC32Q14392 662 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 TEAD2Q15562 447 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 TTC38Q5R3I4 469 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 RNF19BQ6ZMZ0 732 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 TAS1R3Q7RTX0 852 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 YAF2Q8IY57 180 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 SPEM1Q8N4L4 309 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 DRC1Q96MC2 740 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 FOXP1Q9H334 677 aaPredicted RBP17.21■□□□□ 0.35
LMNA-223ENST00000515459 SEMA4GQ9NTN9 838 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 STK24Q9Y6E0 443 aa17.21■□□□□ 0.35
LMNA-223ENST00000515459 ACACBO00763 2458 aa17.21■□□□□ 0.34
LMNA-223ENST00000515459 NCANO14594 1321 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms