RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TBX3O15119 743 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 MUSKO15146 869 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ZNF185O15231 689 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 KRT86O43790 486 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 B4GALT4O60513 344 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 TLR2O60603 784 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 GH2P01242 217 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CIITAP33076 1130 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ADARP55265 1226 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 BASP1P80723 227 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 FKBP3Q00688 224 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 NR1D2Q14995 579 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 PRR16Q569H4 304 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 HSP90AA5PQ58FG0 334 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 IGSF11Q5DX21 431 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 PDXDC1Q6P996 788 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 EPM2AIP1Q7L775 607 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 PCGF5Q86SE9 256 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 TRIM59Q8IWR1 403 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 SLFN12Q8IYM2 578 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CYP2W1Q8TAV3 490 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 TBC1D20Q96BZ9 403 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 PSMB7Q99436 277 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 BCAS3Q9H6U6 928 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 SH2D4AQ9H788 454 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 SALL4Q9UJQ4 1053 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 PITPNM2Q9BZ72 1349 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CNTNAP1P78357 1384 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 IGLV3-22A0A075B6J6 115 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 LRRC72A6NJI9 287 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 PDE2AO00408 941 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 MSH4O15457 936 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ITGA2BP08514 1039 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 DSG3P32926 999 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 EIF4A3P38919 411 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CCNFP41002 786 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ECE1P42892 770 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 GJA9P57773 515 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 APBA1Q02410 837 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 GIT2Q14161 759 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 KIF22Q14807 665 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ACAP1Q15027 740 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CEP78Q5JTW2 689 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CCDC84Q86UT8 332 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 LONP2Q86WA8 852 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 LURAP1LQ8IV03 231 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 NSMCE3Q96MG7 304 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 SEMA4AQ9H3S1 761 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 TRPC7Q9HCX4 862 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ETNK2Q9NVF9 386 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 CTNNAL1Q9UBT7 734 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 SAR1BQ9Y6B6 198 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 SLC4A7Q9Y6M7 1214 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 ANO9A1A5B4 782 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PIK3CDO00329 1044 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 GLI1P08151 1106 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 BMP3P12645 472 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 RPA1P27694 616 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 HOXC13P31276 330 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 AP2B1P63010 937 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 HPCAP84074 193 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 RIPK1Q13546 671 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CYTH1Q15438 398 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PTGISQ16647 500 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SH3D19Q5HYK7 790 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 NXNQ6DKJ4 435 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PHLDB3Q6NSJ2 640 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 WDR93Q6P2C0 686 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CCDC81Q6ZN84 652 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 NELFCDQ8IXH7 590 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SPICE1Q8N0Z3 855 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CCDC63Q8NA47 563 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 TOR1AIP2Q8NFQ8 470 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 OSCP1Q8WVF1 389 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKRD27Q96NW4 1050 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 TSG101Q99816 390 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PLVAPQ9BX97 442 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 MMRN2Q9H8L6 949 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 UBN1Q9NPG3 1134 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 EMILIN3Q9NT22 766 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SCOCQ9UIL1 159 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PCDHA13Q9Y5I0 950 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 ZNF536O15090 1300 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 UTRNP46939 3433 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 GOLGA8JA6NMD2 632 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 GOLGA8TH3BQL2 631 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 RBAK-RBAKDNI3L0D1 243 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 TRAF5O00463 557 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PJA2O43164 708 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBBP07437 444 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CYP3A4P08684 503 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 GSTA2P09210 222 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CCND1P24385 295 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 HOXA13P31271 388 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SNX16P57768 344 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SKIV2LQ15477 1246 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 ODF2Q5BJF6 829 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 METTL21CQ5VZV1 264 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms