RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 GLYCTKQ8IVS8 523 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 SRBD1Q8N5C6 995 aaKnown RBP7.12□□□□□ -1.27
CLDND1-225ENST00000512147 NECAB1Q8N987 351 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 SPATA3Q8NHX4 192 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 CTCFLQ8NI51 663 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-225ENST00000512147 KCNE4Q8WWG9 221 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 SNX21Q969T3 373 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 ZSCAN31Q96LW9 406 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-225ENST00000512147 UBA5Q9GZZ9 404 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 GBP3Q9H0R5 595 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 EPN3Q9H201 632 aa7.12□□□□□ -1.27
CLDND1-225ENST00000512147 CIZ1Q9ULV3 898 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-225ENST00000512147 CRYBG3Q68DQ2 2970 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 FBN1P35555 2871 aaKnown RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 BOD1L1Q8NFC6 3051 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 COL4A2P08572 1712 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 ARNTLO00327 626 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 TNFSF14O43557 240 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 CYTH3O43739 400 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 PPFIA2O75334 1257 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 MYCLP12524 364 aaPredicted RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 DRD2P14416 443 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 HOXA9P31269 272 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 KIF5BP33176 963 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 GNAQP50148 359 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 ST3GAL1Q11201 340 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 GRSF1Q12849 480 aaKnown RBP eCLIP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 TARDBPQ13148 414 aaKnown RBP eCLIP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 NTRK3Q16288 839 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 TMTC3Q6ZXV5 915 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 SYT13Q7L8C5 426 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 MAMDC2Q7Z304 686 aaPredicted RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 MFSD6LQ8IWD5 586 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 DHX40Q8IX18 779 aaKnown RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 ADGRF4Q8IZF3 695 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 CCDC82Q8N4S0 544 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 TSTD1Q8NFU3 115 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 SYTL5Q8TDW5 730 aaPredicted RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 ZBTB10Q96DT7 871 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 TMX3Q96JJ7 454 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 TMEM209Q96SK2 561 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 LZTS2Q9BRK4 669 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 DPH1Q9BZG8 443 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 MAF1Q9H063 256 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 SLKQ9H2G2 1235 aaPredicted RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 RIOX1Q9H6W3 641 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 JMJD4Q9H9V9 463 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 VAT1LQ9HCJ6 419 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 RBM28Q9NW13 759 aaKnown RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 HCFC1R1Q9NWW0 138 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 DNMT3BQ9UBC3 853 aaKnown RBP7.11□□□□□ -1.27
CLDND1-225ENST00000512147 DNAJB4Q9UDY4 337 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 FAN1Q9Y2M0 1017 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 PCDHA2Q9Y5H9 948 aa7.11□□□□□ -1.27
CLDND1-225ENST00000512147 CCDC196A0A1B0GTZ2 297 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 DTNBO60941 627 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 RNF40O75150 1001 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 CTDNEP1O95476 244 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 IFNAR1P17181 557 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 SMARCA1P28370 1054 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 MYO1EQ12965 1108 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 NEDD9Q14511 834 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 DMC1Q14565 340 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 LINC00303Q3SY05 128 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 FHL5Q5TD97 284 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 METTL7BQ6UX53 244 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 CCDC81Q6ZN84 652 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 ATCAYQ86WG3 371 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 DAGLBQ8NCG7 672 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 ENGASEQ8NFI3 743 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 TTC8Q8TAM2 541 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 BAHD1Q8TBE0 780 aaPredicted RBP7.1□□□□□ -1.27
CLDND1-225ENST00000512147 TMEM40Q8WWA1 233 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 SMARCD2Q92925 531 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 TNPO1Q92973 898 aaKnown RBP7.1□□□□□ -1.27
CLDND1-225ENST00000512147 MTMR8Q96EF0 704 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 SPACA7Q96KW9 195 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 HERC2P3Q9BVR0 1158 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 TBC1D13Q9NVG8 400 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 ERAP1Q9NZ08 941 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 ITGB1BP2Q9UKP3 347 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 WNT6Q9Y6F9 365 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 CCDC168Q8NDH2 2452 aa7.1□□□□□ -1.27
CLDND1-225ENST00000512147 CNTNAP5Q8WYK1 1306 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 A0A0U1RQF3 1178 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 SMIM35A0A1B0GVV1 85 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 hCG_1642624A0A1W2PR95 340 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 K7ELQ4 463 aaPredicted RBP7.09□□□□□ -1.27
CLDND1-225ENST00000512147 CHADO15335 359 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 FLRT2O43155 660 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
CLDND1-225ENST00000512147 DHX16O60231 1041 aaKnown RBP7.09□□□□□ -1.27
CLDND1-225ENST00000512147 MARK3P27448 753 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 VIPR2P41587 438 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 DSG1Q02413 1049 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 CREMQ03060 361 aa7.09□□□□□ -1.27
CLDND1-225ENST00000512147 CUL4AQ13619 759 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms