RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ZSCAN5DPP0CG00 497 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 RPA3P35244 121 aaPredicted RBP14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 PEX19P40855 299 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 YARSP54577 528 aaKnown RBP14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 GRIK3Q13003 919 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 SETDB1Q15047 1291 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 SV2AQ7L0J3 742 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 GSTA5Q7RTV2 222 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 CCDC89Q8N998 374 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 SLC7A6OSQ96CW6 309 aaPredicted RBP14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 LRRC37BQ96QE4 947 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 OSBPL8Q9BZF1 889 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 FHDC1Q9C0D6 1143 aaPredicted RBP14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 RANBP17Q9H2T7 1088 aaKnown RBP14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 TRABDQ9H4I3 376 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 RNPEPL1Q9HAU8 725 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 USTQ9Y2C2 406 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 USH1CQ9Y6N9 552 aa14.25□□□□□ -0.13
SNCAIP-209ENST00000508017 CBX6O95503 412 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 FGFR1P11362 822 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 ETS1P14921 441 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 EPHB2P29323 1055 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 NCKAP1LP55160 1127 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 SLC1A5Q15758 541 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 CCNG2Q16589 344 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 PARP6Q2NL67 630 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 FAM102BQ5T8I3 360 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 PCNX4Q63HM2 1172 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 LONP2Q86WA8 852 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 ZCCHC9Q8N567 271 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 NAF1Q96HR8 494 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 CSRNP1Q96S65 589 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 EHMT1Q9H9B1 1298 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 KDM4FA0A1W2PPD8 638 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 MAGEB2O15479 319 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 PROSCO94903 275 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 CNGA1P29973 690 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 YWHABP31946 246 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 SSR1P43307 286 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 RAD23BP54727 409 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 DACT2Q5SW24 774 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 SLC39A4Q6P5W5 647 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 RELL1Q8IUW5 271 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 PASD1Q8IV76 773 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 TTC8Q8TAM2 541 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 POMGNT1Q8WZA1 660 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 TBC1D10AQ9BXI6 508 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 AVENQ9NQS1 362 aaPredicted RBP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 TBX20Q9UMR3 447 aa14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 MRPL11Q9Y3B7 192 aaKnown RBP14.24□□□□□ -0.13
SNCAIP-209ENST00000508017 PI4K2BG5E9Z4 385 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 H0Y3Z8 333 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 KRT10P13645 584 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 CALB2P22676 271 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 SLC1A1P43005 524 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 SPARCL1Q14515 664 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 LDHDQ86WU2 507 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 AGGF1Q8N302 714 aaeCLIP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 C10orf82Q8WW14 230 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 CYP39A1Q9NYL5 469 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 CORO1CQ9ULV4 474 aaPredicted RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 NUMBLQ9Y6R0 609 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 A0A1W2PPM1 405 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 EDF1O60869 148 aaKnown RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 ABHD2P08910 425 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 LINGO3P0C6S8 592 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 TPBGLP0DKB5 382 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 KRT15P19012 456 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 SOX10P56693 466 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 ATP13A4Q4VNC1 1196 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 KAZNQ674X7 775 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 LMBRD2Q68DH5 695 aaPredicted RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 RIBC1Q8N443 379 aaPredicted RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 BBOF1Q8ND07 529 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 TMEM161BQ8NDZ6 487 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 C11orf70Q9BRQ4 267 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 MOV10L1Q9BXT6 1211 aaKnown RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 OSBPL1AQ9BXW6 950 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 ST6GALNAC4Q9H4F1 302 aa14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 ASTN2O75129 1339 aaPredicted RBP14.23□□□□□ -0.13
SNCAIP-209ENST00000508017 PPP1R12AO14974 1030 aaPredicted RBP14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 PRPF4O43172 522 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 BANF1O75531 89 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 TCF4P15884 667 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 PECAM1P16284 738 aaPredicted RBP14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 DSG3P32926 999 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 PDK4Q16654 411 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 MON1BQ7L1V2 547 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 SUPT20HQ8NEM7 779 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 STK32AQ8WU08 396 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 AGBL1Q96MI9 1066 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 CFAP57Q96MR6 1250 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 NUDCD1Q96RS6 583 aa14.22□□□□□ -0.13
SNCAIP-209ENST00000508017 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms