RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PLEKHO2Q8TD55 490 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 HELQQ8TDG4 1101 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 PAIP2Q9BPZ3 127 aaKnown RBP18.82■□□□□ 0.6
NUP54-205ENST00000507257 KCNQ5Q9NR82 932 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 NMRK1Q9NWW6 199 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 ARHGEF35A5YM69 484 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 SPDYE5A6NIY4 337 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 K7ENM7 598 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 TOM1O60784 492 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 TRIP13Q15645 432 aaPredicted RBP18.82■□□□□ 0.6
NUP54-205ENST00000507257 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 TAF1BQ53T94 588 aaPredicted RBP18.82■□□□□ 0.6
NUP54-205ENST00000507257 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 OTOAQ7RTW8 1153 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 KIAA0825Q8IV33 1275 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 KATNAL2Q8IYT4 538 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 PPM1KQ8N3J5 372 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 PHACTR1Q9C0D0 580 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 HSPBP1Q9NZL4 362 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 WDR35Q9P2L0 1181 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 GRID1Q9ULK0 1009 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 R3HDM2Q9Y2K5 976 aaKnown RBP18.82■□□□□ 0.6
NUP54-205ENST00000507257 DNALI1O14645 258 aaPredicted RBP18.81■□□□□ 0.6
NUP54-205ENST00000507257 ZBTB39O15060 712 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 GNPATO15228 680 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 GAS7O60861 476 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 ENTPD5O75356 428 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 RTN3O95197 1032 aaPredicted RBP18.81■□□□□ 0.6
NUP54-205ENST00000507257 CBX6O95503 412 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 UNGP13051 313 aaPredicted RBP18.81■□□□□ 0.6
NUP54-205ENST00000507257 TUBP50607 506 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 ZNF449Q6P9G9 518 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 MAEAQ7L5Y9 396 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 ZNF677Q86XU0 584 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 MCOLN2Q8IZK6 566 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 SPOCK2Q92563 424 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 ZNF75CPQ92670 426 aaPredicted RBP18.81■□□□□ 0.6
NUP54-205ENST00000507257 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
NUP54-205ENST00000507257 PWWP2AQ96N64 755 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 SCOCQ9UIL1 159 aa18.81■□□□□ 0.6
NUP54-205ENST00000507257 FAM170AA1A519 330 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 DNAJC6O75061 913 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 SPAG7O75391 227 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 BBOX1O75936 387 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 PROSCO94903 275 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 PDHA1P08559 390 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 TROVE2P10155 538 aaKnown RBP eCLIP18.8■□□□□ 0.6
NUP54-205ENST00000507257 ENPEPQ07075 957 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 HHIPL2Q6UWX4 724 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 ENOSF1Q7L5Y1 443 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 SESTD1Q86VW0 696 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 DHX37Q8IY37 1157 aaKnown RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 OGFOD1Q8N543 542 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 MIPEPQ99797 713 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 BTBD10Q9BSF8 475 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 CCDC28BQ9BUN5 200 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 ANKFY1Q9P2R3 1169 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 WRAP73Q9P2S5 460 aaPredicted RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 AHDC1Q5TGY3 1603 aaPredicted RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 RALAP11233 206 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 CA4P22748 312 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 RPA3P35244 121 aaPredicted RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 GTF2BQ00403 316 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 PDCD2Q16342 344 aaPredicted RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 PKN2Q16513 984 aaKnown RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 GSTA3Q16772 222 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 USH1GQ495M9 461 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 HHATQ5VTY9 493 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 FAM91A1Q658Y4 838 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 KRT39Q6A163 491 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 SMIM5Q71RC9 77 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 SIAH1Q8IUQ4 282 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 RHOT1Q8IXI2 618 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 EXD1Q8NHP7 514 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 ARHGEF1Q92888 912 aaKnown RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 PTCD3Q96EY7 689 aaKnown RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 NT5C1BQ96P26 610 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 CBWD1Q9BRT8 395 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 TIPINQ9BVW5 301 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 CADM1Q9BY67 442 aaKnown RBP18.8■□□□□ 0.6
NUP54-205ENST00000507257 FAM192AQ9GZU8 254 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
NUP54-205ENST00000507257 ALOX15BO15296 676 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 FDX1P10109 184 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 KRT15P19012 456 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 GTF2H1P32780 548 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 GTF2IP78347 998 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 MORF4L2Q15014 288 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 SLC1A5Q15758 541 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 GNPTABQ3T906 1256 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 KHDC1Q4VXA5 237 aaKnown RBP18.79■□□□□ 0.6
NUP54-205ENST00000507257 RBM26Q5T8P6 1007 aaKnown RBP18.79■□□□□ 0.6
NUP54-205ENST00000507257 PCNX4Q63HM2 1172 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 BICD1Q96G01 975 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 OSBPL8Q9BZF1 889 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 PCIF1Q9H4Z3 704 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 TMEM8AQ9HCN3 771 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 SAYSD1Q9NPB0 183 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 PSMC3IPQ9P2W1 217 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms