RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 SNRPA1P09661 255 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 DDX6P26196 483 aaKnown RBP eCLIP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 FLT3LGP49771 235 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 BRD3Q15059 726 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 TTF1Q15361 905 aaPredicted RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 ADRM1Q16186 407 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 MUM1Q2TAK8 710 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 MST1LQ2TV78 715 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 SPDYE7PQ495Y7 208 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 AFMIDQ63HM1 303 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 GPRIN1Q7Z2K8 1008 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 RAVER1Q8IY67 606 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 TRMT2AQ8IZ69 625 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 AFAP1L2Q8N4X5 818 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 LMBR1Q8WVP7 490 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 RNF31Q96EP0 1072 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 MYEOVQ96EZ4 313 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 MPHOSPH6Q99547 160 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 MRI1Q9BV20 369 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 SERHL2Q9H4I8 314 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 RBM12Q9NTZ6 932 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 PACSIN3Q9UKS6 424 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 NOX1Q9Y5S8 564 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 SHROOM2Q13796 1616 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 ABCC5O15440 1437 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ANKRD30AQ9BXX3 1397 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 PLXNC1O60486 1568 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 DIRC3C9JPN6 131 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 PRKD3O94806 890 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ITGAMP11215 1152 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ATP5JP18859 108 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 POU3F3P20264 500 aaPredicted RBP5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZFP36P26651 326 aaKnown RBP5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 TP53BP2Q13625 1128 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZRSR2Q15696 482 aaKnown RBP5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 CSRP2Q16527 193 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 FAM47AQ5JRC9 791 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZNF529Q6P280 563 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 DRICH1Q6PGQ1 229 aaPredicted RBP5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 Q6ZPA2 131 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 Q6ZVL8 140 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 UBE3BQ7Z3V4 1068 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZSWIM1Q9BR11 485 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 GREM2Q9H772 168 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 ARNT2Q9HBZ2 717 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 LANCL2Q9NS86 450 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 TMEM140Q9NV12 185 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 MOCS1Q9NZB8 636 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 AJAP1Q9UKB5 411 aaPredicted RBP5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 FPGT-TNNI3KV9GXZ4 949 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 GPATCH8Q9UKJ3 1502 aaKnown RBP5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 PLEKHH2Q8IVE3 1493 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 MYO5CQ9NQX4 1742 aa5.31□□□□□ -1.56
CALCOCO2-208ENST00000506971 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 ERN1O75460 977 aaKnown RBP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 POMCP01189 267 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 IL2RBP14784 551 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZSCAN20P17040 1043 aaPredicted RBP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 PTMSP20962 102 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 PLA2G5P39877 138 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 SLC5A3P53794 718 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 POU5F1BQ06416 359 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 FAPQ12884 760 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 ACAP2Q15057 778 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 RHOUQ7L0Q8 258 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 DDX42Q86XP3 938 aaKnown RBP eCLIP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 SLC44A3Q8N4M1 653 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 OR56A1Q8NGH5 318 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 NAP1L4Q99733 375 aaKnown RBP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 BCO1Q9HAY6 547 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 CCM2LQ9NUG4 571 aaPredicted RBP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 MTO1Q9Y2Z2 717 aaKnown RBP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 DENND4BO75064 1496 aaPredicted RBP5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 MBD5Q9P267 1494 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 NCOA1Q15788 1441 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 CNTLNQ9NXG0 1405 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 KDM6BO15054 1643 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 LAMC1P11047 1609 aa5.3□□□□□ -1.56
CALCOCO2-208ENST00000506971 UNC13BO14795 1591 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 ABCC10Q5T3U5 1492 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 SREBF1P36956 1147 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 ALDH1A3P47895 512 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 AVPR1BP47901 424 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 CREMQ03060 361 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 FOXD4Q12950 439 aaPredicted RBP5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 BEAN1Q3B7T3 259 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 SYCP2LQ5T4T6 812 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 STRIP1Q5VSL9 837 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 FOXR2Q6PJQ5 311 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZNF572Q7Z3I7 529 aaPredicted RBP5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 SPATS2Q86XZ4 545 aaKnown RBP5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 PPM1EQ8WY54 764 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 DPF2Q92785 391 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 ALOXE3Q9BYJ1 711 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
CALCOCO2-208ENST00000506971 CHST2Q9Y4C5 530 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms