RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ERCC6LQ2NKX8 1250 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 MEI1Q5TIA1 1274 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 ACAD10Q6JQN1 1059 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TAF2Q6P1X5 1199 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TRIM72Q6ZMU5 477 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 CATSPER4Q7RTX7 472 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 MTERF4Q7Z6M4 381 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 SLFN11Q7Z7L1 901 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 NOP9Q86U38 636 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 RHOT2Q8IXI1 618 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 GPR161Q8N6U8 529 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 UBR7Q8N806 425 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 C7orf31Q8N865 590 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 SLC20A1Q8WUM9 679 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 RFFLQ8WZ73 363 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 DDX1Q92499 740 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TSC1Q92574 1164 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 LENG1Q96BZ8 264 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 CPB2Q96IY4 423 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TSPAN18Q96SJ8 248 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 PPP1R16BQ96T49 567 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 CCDC94Q9BW85 323 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TLR10Q9BXR5 811 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 FAM49AQ9H0Q0 323 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 APOBEC3GQ9HC16 384 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 HDAC6Q9UBN7 1215 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 NUB1Q9Y5A7 615 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 PCDHB4Q9Y5E5 795 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 MROH7Q68CQ1 1323 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 GRID2IPA4D2P6 1211 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 CES2O00748 559 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 TREHO43280 583 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 MTA2O94776 668 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 TUBBP07437 444 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 MMEP08473 750 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 C6orf222P0C671 652 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 CXCL8P10145 99 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 RARBP10826 455 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 EIF4BP23588 611 aaKnown RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 HOXA11P31270 313 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 ATICP31939 592 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 PAFAH1B1P43034 410 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 CRYBB1P53674 252 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 MYL6P60660 151 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 OSTNP61366 133 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 CACNB2Q08289 660 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 NAA30Q147X3 362 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 RPS6KA1Q15418 735 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 SLC10A6Q3KNW5 377 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 SPOPLQ6IQ16 392 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 NOTUMQ6P988 496 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 RUFY4Q6ZNE9 571 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 ZNF572Q7Z3I7 529 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 CDR2LQ86X02 465 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 EFCAB13Q8IY85 973 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 CEP120Q8N960 986 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 LRRC57Q8N9N7 239 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 LRRN4CLQ8ND94 238 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 SLC35G2Q8TBE7 412 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 DNAJB3Q8WWF6 145 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 PBKQ96KB5 322 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 DEFB118Q96PH6 123 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 OSBPL9Q96SU4 736 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 PCDHB18PQ96TA0 734 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 MTMR12Q9C0I1 747 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 FAM124BQ9H5Z6 455 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 VRTNQ9H8Y1 702 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 PAK6Q9NQU5 681 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 TAS2R14Q9NYV8 317 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 PUF60Q9UHX1 559 aaKnown RBP8.62□□□□□ -1.03
COL4A5-208ENST00000505728 DERAQ9Y315 318 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 C2CD2Q9Y426 696 aa8.62□□□□□ -1.03
COL4A5-208ENST00000505728 TMCO5BA8MYB1 307 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
COL4A5-208ENST00000505728 KIF4AO95239 1232 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
COL4A5-208ENST00000505728 CYP1A2P05177 515 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 MYBL1P10243 752 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-208ENST00000505728 CST5P28325 142 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-208ENST00000505728 YARSP54577 528 aaKnown RBP8.61□□□□□ -1.03
COL4A5-208ENST00000505728 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-208ENST00000505728 RBP5P82980 135 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 TRIM32Q13049 653 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 HIC1Q14526 733 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 TMEM132DQ14C87 1099 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 SNX17Q15036 470 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 ELF2Q15723 593 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 CLEC16AQ2KHT3 1053 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 ZNF699Q32M78 642 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 ZNF667Q5HYK9 610 aa8.61□□□□□ -1.03
COL4A5-208ENST00000505728 TEX35Q5T0J7 233 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms