RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 PBX1P40424 430 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 DSC1Q08554 894 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 KCNMA1Q12791 1236 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 BTG3Q14201 252 aaPredicted RBP14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 SHHQ15465 462 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 ZNF699Q32M78 642 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 C9orf50Q5SZB4 431 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 TRIM65Q6PJ69 517 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 VSTM4Q8IW00 320 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 DRC7Q8IY82 874 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 COLGALT2Q8IYK4 626 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 NEK11Q8NG66 645 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 LMO3Q8TAP4 145 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 HPDLQ96IR7 371 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 NT5C1BQ96P26 610 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 RAD9AQ99638 391 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 PI4K2AQ9BTU6 479 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 PLCB1Q9NQ66 1216 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 PIRO00625 290 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 TLL1O43897 1013 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 STAU1O95793 577 aaKnown RBP14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 ASS1P00966 412 aaKnown RBP14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 P4HA1P13674 534 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 PAX3P23760 479 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 CDC25BP30305 580 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 OR1G1P47890 313 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 KLK7P49862 253 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 CLCNKBP51801 687 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 HTRA4P83105 476 aaPredicted RBP14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 LRMPQ12912 555 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 PTPN21Q16825 1174 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 UPP1Q16831 310 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 ZNF667Q5HYK9 610 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 SPOUT1Q5T280 376 aaKnown RBP14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 SPECC1LQ69YQ0 1117 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 TMEM130Q8N3G9 435 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 IQCDQ96DY2 449 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 ZNF560Q96MR9 790 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 TMEM175Q9BSA9 504 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 NUP58Q9BVL2 599 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 COLEC11Q9BWP8 271 aa14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.89□□□□□ -0.034e-7■■■■■ 179.3
CYSTM1-202ENST00000504227 FAM207AQ9NSI2 230 aaPredicted RBP14.89□□□□□ -0.03
CYSTM1-202ENST00000504227 CARNS1A5YM72 827 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 PPEF2O14830 753 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 B3GAT3O94766 335 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 TRIM21P19474 475 aaKnown RBP14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 ALDH7A1P49419 539 aaKnown RBP14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 TAF6P49848 677 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 NOP14P78316 857 aaKnown RBP14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 WDR72Q3MJ13 1102 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 SV2CQ496J9 727 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 KLHDC7AQ5VTJ3 777 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 SCARA3Q6AZY7 606 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 TMC6Q7Z403 805 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 PPFIBP1Q86W92 1011 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 TATDN2Q93075 761 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 FAM81BQ96LP2 452 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 XYLT2Q9H1B5 865 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 RC3H2Q9HBD1 1191 aaKnown RBP14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 DNAJB4Q9UDY4 337 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 FAN1Q9Y2M0 1017 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 DAAM1Q9Y4D1 1078 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 NUB1Q9Y5A7 615 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 ITIH6Q6UXX5 1313 aa14.88□□□□□ -0.03
CYSTM1-202ENST00000504227 PDCD11Q14690 1871 aaKnown RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 LRRN2O75325 713 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 TPM1P09493 284 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 BMP8BP34820 402 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 SLC11A1P49279 550 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 MFAP3P55082 362 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 BCAR1P56945 870 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 LILRA4P59901 499 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 TNNC1P63316 161 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 MLLT1Q03111 559 aaPredicted RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 SPOPLQ6IQ16 392 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 PHLDB3Q6NSJ2 640 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 PPM1KQ8N3J5 372 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 FIBCD1Q8N539 461 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 RABGGTAQ92696 567 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 FAXDC2Q96IV6 333 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 NIF3L1Q9GZT8 377 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 CWH43Q9H720 699 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 VRTNQ9H8Y1 702 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 SIX2Q9NPC8 291 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 UBE2TQ9NPD8 197 aaPredicted RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 AAASQ9NRG9 546 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 CACNG4Q9UBN1 327 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 PRG3Q9Y2Y8 225 aaPredicted RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 TDRD15B5MCY1 1934 aaKnown RBP14.87□□□□□ -0.03
CYSTM1-202ENST00000504227 TMEM189-UBE2V1I3L0A0 370 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms