RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 SEZ6Q53EL9 994 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 ANKS1BQ7Z6G8 1248 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 CNPY4Q8N129 248 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 OR5B17Q8NGF7 314 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 DEPTORQ8TB45 409 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 CHMP6Q96FZ7 201 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 ZNF317Q96PQ6 595 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-204ENST00000501271 CEP89Q96ST8 783 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 FAM118BQ9BPY3 351 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 HEMGNQ9BXL5 484 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 OSBPL7Q9BZF2 842 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 NUB1Q9Y5A7 615 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 PCDHB4Q9Y5E5 795 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 SSC5DA1L4H1 1573 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 PTPRFP10586 1907 aa10.5□□□□□ -0.73
CLIP1-204ENST00000501271 ATG7O95352 703 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CLTAP09496 248 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ABCD1P33897 745 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ARL2P36404 184 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 NAMPTP43490 491 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ITGA8P53708 1063 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 TGFB2P61812 414 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 NOP14P78316 857 aaKnown RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CNTN2Q02246 1040 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 MAMLD1Q13495 774 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 LONRF1Q17RB8 773 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ANGEL2Q5VTE6 544 aaKnown RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 KCNV1Q6PIU1 500 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 MMS22LQ6ZRQ5 1243 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 TRMT10CQ7L0Y3 403 aaKnown RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CPLX4Q7Z7G2 160 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC50Q8IVM0 306 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CACNA2D3Q8IZS8 1091 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ABRAQ8N0Z2 381 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 SNF8Q96H20 258 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CABS1Q96KC9 395 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CGRRF1Q99675 332 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 JPH2Q9BR39 696 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 MSTO1Q9BUK6 570 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 DNAJC17Q9NVM6 304 aaKnown RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ADGRA2Q96PE1 1338 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CNTNAP2Q9UHC6 1331 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 A0A0B4J269 797 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 C19orf81C9J6K1 198 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 K7ERI5 159 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 HARSP12081 509 aaKnown RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ITIH2P19823 946 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 VPS41P49754 854 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ACTN3Q08043 901 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 PTP4A2Q12974 167 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 GKAP1Q5VSY0 366 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 MFSD5Q6N075 450 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 SEPT14Q6ZU15 432 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CROCCP2Q86T23 111 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC13Q8IYE1 715 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 KCNN1Q92952 543 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 PWWP2AQ96N64 755 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 MTFR1LQ9H019 292 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 ADAM22Q9P0K1 906 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 RGS17Q9UGC6 210 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-204ENST00000501271 NEU2Q9Y3R4 380 aa10.49□□□□□ -0.73
CLIP1-204ENST00000501271 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 VGLL3A8MV65 326 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 PSTPIP1O43586 416 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 CD58P19256 250 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 ICAM3P32942 547 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 GJC1P36383 396 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 STXBP2Q15833 593 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 LIN9Q5TKA1 542 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 SLFN12LQ6IEE8 588 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 POTEAQ6S8J7 498 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC121Q6ZUS5 278 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 EXOC3L1Q86VI1 746 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 MAIP1Q8WWC4 291 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 SLC7A3Q8WY07 619 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 KLRG1Q96E93 195 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 PCYT2Q99447 389 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 PRMT1Q99873 361 aaKnown RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 CCDC113Q9H0I3 377 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 CNTN6Q9UQ52 1028 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 MGAMO43451 1857 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 POLR2AP24928 1970 aaKnown RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 A0A0G2JMZ2 1700 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 LRRC37A2A6NM11 1700 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 H0YHG0 523 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 THAP12O43422 761 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 ZBTB7AO95365 584 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 GAS8O95995 478 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 ATF2P15336 505 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
CLIP1-204ENST00000501271 MAN1A1P33908 653 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 DRP2Q13474 957 aa10.48□□□□□ -0.73
CLIP1-204ENST00000501271 CAPSQ13938 189 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms