RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	GLUD1	P00367	558 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	F13A1	P00488	732 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	EPCAM	P16422	314 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	NCKAP1L	P55160	1127 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	ITIH3	Q06033	890 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	PPP2R3A	Q06190	1150 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	SLC39A14	Q15043	492 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	ZPBP2	Q6X784	338 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	EPS8L1	Q8TE68	723 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	B3GALT6	Q96L58	329 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	FBXL18	Q96ME1	805 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	UROC1	Q96N76	676 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	OCSTAMP	Q9BR26	566 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	PHF7	Q9BWX1	381 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	VN1R3	Q9BXE9	311 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	SFXN1	Q9H9B4	322 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	BLOC1S4	Q9NUP1	217 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	TFIP11	Q9UBB9	837 aa	Known RBP	11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	NR2E1	Q9Y466	385 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	NUB1	Q9Y5A7	615 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	IRAK3	Q9Y616	596 aa		11.64	□□□□□ -0.55
CDK11A-222	ENST00000498810	DENND4A	Q7Z401	1863 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	PTGES	O14684	152 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	TRAPPC3	O43617	180 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	B3GAT3	O94766	335 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	YEATS4	O95619	227 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	CNP	P09543	421 aa	Known RBP	11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	ALAD	P13716	330 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	FSHR	P23945	695 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	DDIT3	P35638	169 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	MTHFR	P42898	656 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	ME1	P48163	572 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	NASP	P49321	788 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	BECN1	Q14457	450 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	ARSH	Q5FYA8	562 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	FAM171A1	Q5VUB5	890 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	PDXDC1	Q6P996	788 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	TMEM184A	Q6ZMB5	413 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	USP49	Q70CQ1	688 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	TAS1R3	Q7RTX0	852 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	SFR1	Q86XK3	245 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	KCNG4	Q8TDN1	519 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	SNX27	Q96L92	541 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	NECTIN4	Q96NY8	510 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	KLHL5	Q96PQ7	755 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	ARHGAP9	Q9BRR9	750 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	TTPAL	Q9BTX7	342 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	MSTO1	Q9BUK6	570 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	PANK2	Q9BZ23	570 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	LRRC27	Q9C0I9	530 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	MRPL44	Q9H9J2	332 aa	Known RBP	11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	MAN1C1	Q9NR34	630 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	TBX20	Q9UMR3	447 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	ANK1	P16157	1881 aa		11.63	□□□□□ -0.55
CDK11A-222	ENST00000498810	XPOT	O43592	962 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	DCX	O43602	365 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	CUTA	O60888	179 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	PPP6R2	O75170	966 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	GCNT3	O95395	438 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	CXCL8	P10145	99 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	MYB	P10242	640 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	GAP43	P17677	238 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	NMT1	P30419	496 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	DSG1	Q02413	1049 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	PSMD5	Q16401	504 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	KYAT1	Q16773	422 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	SEZ6	Q53EL9	994 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	ATAT1	Q5SQI0	421 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	LCE2C	Q5TA81	110 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	LIN9	Q5TKA1	542 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	TMC5	Q6UXY8	1006 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	SYCP3	Q8IZU3	236 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	C12orf76	Q8N812	135 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	TDRD5	Q8NAT2	981 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	LINC00301	Q8NCQ3	95 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	GSTCD	Q8NEC7	633 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	NOC3L	Q8WTT2	800 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	ZBTB45	Q96K62	511 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	PAAF1	Q9BRP4	392 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	NTPCR	Q9BSD7	190 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	GPR62	Q9BZJ7	368 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	RPF1	Q9H9Y2	349 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	PIDD1	Q9HB75	910 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	GOLGA2P5	Q9HBQ8	144 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	FAM13B	Q9NYF5	915 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	SEL1L	Q9UBV2	794 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	CFAP45	Q9UL16	551 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	EXOC7	Q9UPT5	735 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	GPSM3	Q9Y4H4	160 aa		11.62	□□□□□ -0.55
CDK11A-222	ENST00000498810	SMIM28	A0A1B0GU29	152 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	PODXL	O00592	558 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	TEX28	O15482	410 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	WEE2	P0C1S8	567 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	RPL17	P18621	184 aa	Known RBP	11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	PROZ	P22891	400 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	MCM4	P33991	863 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	CLCN4	P51793	760 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	CLCNKB	P51801	687 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms