RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ACBD3Q9H3P7 528 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 UBE2TQ9NPD8 197 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 A1CFQ9NQ94 594 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 SMC4Q9NTJ3 1288 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CATSPERZQ9NTU4 200 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 BABAM1Q9NWV8 329 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SLC17A7Q9P2U7 560 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ABCF2Q9UG63 623 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ST6GALNAC2Q9UJ37 374 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TDRKHQ9Y2W6 561 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 FLT4P35916 1363 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 KIF27Q86VH2 1401 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 STMND1H3BQB6 276 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ARVCFO00192 962 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CES2O00748 559 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RAB29O14966 203 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZBTB43O43298 467 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 KIF5CO60282 957 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CDC14BO60729 498 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ATG13O75143 517 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FAM155BO75949 473 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RAC2P15153 192 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 JUNBP17275 347 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 RXRAP19793 462 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ADH7P40394 386 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PMS2P54278 862 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 LOXL3P58215 753 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NLRP11P59045 1033 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 PPP2R3AQ06190 1150 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PDE4BQ07343 736 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CNTN1Q12860 1018 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GRIK2Q13002 908 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SAFB2Q14151 953 aaKnown RBP eCLIP1.57□□□□□ -2.16
XRN1-214ENST00000498077 ARL6IP1Q15041 203 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CEBPEQ15744 281 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GFOD2Q3B7J2 385 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 COLEC12Q5KU26 742 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 WSCD1Q658N2 575 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CWF19L1Q69YN2 538 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 SLC9A4Q6AI14 798 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 DEF8Q6ZN54 512 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ANO5Q75V66 913 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CLEC10AQ8IUN9 316 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TCP11L2Q8N4U5 519 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 WDTC1Q8N5D0 677 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 HJURPQ8NCD3 748 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 TNIP2Q8NFZ5 429 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SPATA3Q8NHX4 192 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FCAMRQ8WWV6 532 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 USP13Q92995 863 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 EMID1Q96A84 441 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 WDR89Q96FK6 387 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 SLC2A13Q96QE2 648 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 UBL7Q96S82 380 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 DIAPH3Q9NSV4 1193 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 DNAJC28Q9NX36 388 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NDE1Q9NXR1 346 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MOCS1Q9NZB8 636 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 USP25Q9UHP3 1055 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MID2Q9UJV3 735 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PCDHB6Q9Y5E3 794 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CNOT1A5YKK6 2376 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 LACTBL1A8MY62 500 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 H0Y8G0 127 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 HAS3O00219 553 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PRRG2O14669 202 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 EFCAB14O75071 495 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 EYA4O95677 639 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CHEK2O96017 543 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NR3C2P08235 984 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 APEHP13798 732 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 GCFC2P16383 781 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 CCNE1P24864 410 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ADSLP30566 484 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 PIP4K2AP48426 406 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 AMTP48728 403 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PSMC1P62191 440 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 IRX4P78413 519 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 EFR3AQ14156 821 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 DMC1Q14565 340 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RABEP1Q15276 862 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CYTH1Q15438 398 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FAM133BQ5BKY9 247 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 OLFML2AQ68BL7 652 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PSAPL1Q6NUJ1 521 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FOXR2Q6PJQ5 311 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 DPP8Q6V1X1 898 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 RSPH3Q86UC2 560 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 IGFN1Q86VF2 1251 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CEP57Q86XR8 500 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ANKRD18AQ8IVF6 992 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FAM114A1Q8IWE2 563 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ELMOD1Q8N336 334 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NIPA2Q8N8Q9 360 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PRPF38AQ8NAV1 312 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 SYT8Q8NBV8 401 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 KCNH5Q8NCM2 988 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 REPS2Q8NFH8 660 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TMED6Q8WW62 240 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SNX19Q92543 992 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms