RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 HPS3Q969F9 1004 aa20.29■□□□□ 0.84
RPN1-208ENST00000497415 ZNF707Q96C28 371 aaPredicted RBP20.29■□□□□ 0.84
RPN1-208ENST00000497415 FAM212AQ96EL1 285 aa20.29■□□□□ 0.84
RPN1-208ENST00000497415 SCAND2PQ9GZW5 306 aaPredicted RBP20.29■□□□□ 0.84
RPN1-208ENST00000497415 SERTAD1Q9UHV2 236 aa20.29■□□□□ 0.84
RPN1-208ENST00000497415 HPSEQ9Y251 543 aa20.29■□□□□ 0.84
RPN1-208ENST00000497415 USTQ9Y2C2 406 aa20.29■□□□□ 0.84
RPN1-208ENST00000497415 C2CD2Q9Y426 696 aa20.29■□□□□ 0.84
RPN1-208ENST00000497415 FAM237AA0A1B0GTK4 181 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 PVALEFA0A1B0GWK0 134 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 M0QZQ0 153 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 EIF3DO15371 548 aaKnown RBP eCLIP20.28■□□□□ 0.84
RPN1-208ENST00000497415 ACTN4O43707 911 aaKnown RBP20.28■□□□□ 0.84
RPN1-208ENST00000497415 GPR37L1O60883 481 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 ZMYND10O75800 440 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 LDHAP00338 332 aaKnown RBP20.28■□□□□ 0.84
RPN1-208ENST00000497415 NFICP08651 508 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 PFKFB1P16118 471 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 CASP1P29466 404 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 MCM4P33991 863 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 HOXD13P35453 343 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 AARSP49588 968 aaKnown RBP eCLIP20.28■□□□□ 0.84
RPN1-208ENST00000497415 GUCY2FP51841 1108 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 TMEM132DQ14C87 1099 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 FAM26FQ5R3K3 315 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 VARS2Q5ST30 1063 aaKnown RBP20.28■□□□□ 0.84
RPN1-208ENST00000497415 ZNF507Q8TCN5 953 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 BLZF1Q9H2G9 400 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 C11orf16Q9NQ32 467 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 MUTYHQ9UIF7 546 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 CDY1Q9Y6F8 540 aa20.28■□□□□ 0.84
RPN1-208ENST00000497415 A0A1B0GVL5 298 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 C2CD4DB7Z1M9 353 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 H7C4K7 107 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 AFMP43652 599 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 CUL4BQ13620 913 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 SLC8B1Q6J4K2 584 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 NT5DC4Q86YG4 428 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 ZSWIM2Q8NEG5 633 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 CBWD1Q9BRT8 395 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 PRKD2Q9BZL6 878 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 USP25Q9UHP3 1055 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 PCDHB8Q9UN66 801 aa20.27■□□□□ 0.84
RPN1-208ENST00000497415 ANO9A1A5B4 782 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 PIRO00625 290 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 PPEF2O14830 753 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 KIAA0391O15091 583 aaKnown RBP20.26■□□□□ 0.83
RPN1-208ENST00000497415 IL18RAPO95256 599 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 SP100P23497 879 aaPredicted RBP20.26■□□□□ 0.83
RPN1-208ENST00000497415 PAX3P23760 479 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 HOXA9P31269 272 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 C9orf57Q5W0N0 161 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 CCDC149Q6ZUS6 474 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 BRSK2Q8IWQ3 736 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 ZDHHC14Q8IZN3 488 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 APPL2Q8NEU8 664 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 SMG7Q92540 1137 aaKnown RBP20.26■□□□□ 0.83
RPN1-208ENST00000497415 SAAL1Q96ER3 474 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 FAM213AQ9BRX8 229 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 WDR6Q9NNW5 1121 aaKnown RBP20.26■□□□□ 0.83
RPN1-208ENST00000497415 MYO10Q9HD67 2058 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 SCN1AP35498 2009 aa20.26■□□□□ 0.83
RPN1-208ENST00000497415 A0A1W2PQ27 194 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 A0A1W2PQ64 194 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 A0A1W2PQD8 194 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 KLRC4O43908 158 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 EXTL3O43909 919 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 ABLIM3O94929 683 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 HNRNPA1P09651 372 aaKnown RBP eCLIP20.25■□□□□ 0.83
RPN1-208ENST00000497415 WNT7BP56706 349 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 NUCB2P80303 420 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 UVSSAQ2YD98 709 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 TMEM31Q5JXX7 168 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 LIN9Q5TKA1 542 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 RTL10Q7L3V2 364 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 EFCAB13Q8IY85 973 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 GRAMD1CQ8IYS0 662 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 PLCD3Q8N3E9 789 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 ZNF461Q8TAF7 563 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 PAGE5Q96GU1 130 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 FBXL5Q9UKA1 691 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 UBE4BO95155 1302 aa20.25■□□□□ 0.83
RPN1-208ENST00000497415 C8AP07357 584 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 LILRA4P59901 499 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 ROR1Q01973 937 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 ARMCX5Q6P1M9 558 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 GPD1LQ8N335 351 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 TDRD5Q8NAT2 981 aaKnown RBP20.24■□□□□ 0.83
RPN1-208ENST00000497415 SCFD1Q8WVM8 642 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 EDAQ92838 391 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 LRFN3Q9BTN0 628 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 DPP3Q9NY33 737 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 DOCK6Q96HP0 2047 aa20.24■□□□□ 0.83
RPN1-208ENST00000497415 WDR27A2RRH5 827 aa20.23■□□□□ 0.83
RPN1-208ENST00000497415 GOLGA8IPA6NC78 632 aa20.23■□□□□ 0.83
RPN1-208ENST00000497415 GOLGA8JA6NMD2 632 aa20.23■□□□□ 0.83
RPN1-208ENST00000497415 TGFB1I1O43294 461 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms