RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 ZMYND10O75800 440 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 CYP3A5P20815 502 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 KRT85P78386 507 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 ALCAMQ13740 583 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 RAB33AQ14088 237 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 BECN1Q14457 450 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 TMEM132DQ14C87 1099 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 SPATA1Q5VX52 437 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 CNNM4Q6P4Q7 775 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 FAM213AQ9BRX8 229 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 SERTAD1Q9UHV2 236 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 DOCK8Q8NF50 2099 aa15.72■□□□□ 0.11
PDAP1-204ENST00000496335 A0A1B0GVL5 298 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 SYN3O14994 580 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 XPOTO43592 962 aaKnown RBP15.71■□□□□ 0.11
PDAP1-204ENST00000496335 HOXD13P35453 343 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 ARPP19P56211 112 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 WNT7BP56706 349 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 CUL4BQ13620 913 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 MRPL58Q14197 206 aaKnown RBP15.71■□□□□ 0.11
PDAP1-204ENST00000496335 CCDC149Q6ZUS6 474 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 TDRD5Q8NAT2 981 aaKnown RBP15.71■□□□□ 0.11
PDAP1-204ENST00000496335 BEST2Q8NFU1 509 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 TSPAN18Q96SJ8 248 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 CBWD1Q9BRT8 395 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 PRKD2Q9BZL6 878 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 PCIF1Q9H4Z3 704 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 ASB7Q9H672 318 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 PIDD1Q9HB75 910 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 ZDHHC7Q9NXF8 308 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 LIMD1Q9UGP4 676 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 PCDHB8Q9UN66 801 aa15.71■□□□□ 0.11
PDAP1-204ENST00000496335 TIMM13Q9Y5L4 95 aaPredicted RBP15.71■□□□□ 0.11
PDAP1-204ENST00000496335 M0QZQ0 153 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 ACTN4O43707 911 aaKnown RBP15.7■□□□□ 0.1
PDAP1-204ENST00000496335 TBC1D4O60343 1298 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 N4BP1O75113 896 aaKnown RBP15.7■□□□□ 0.1
PDAP1-204ENST00000496335 PAPLNO95428 1278 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 C8AP07357 584 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 SLFN14P0C7P3 912 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 PFKFB1P16118 471 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 GARTP22102 1010 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 CMA1P23946 247 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 ROR1Q01973 937 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 FAM26FQ5R3K3 315 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 LIN9Q5TKA1 542 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 EFCAB13Q8IY85 973 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 CEP57L1Q8IYX8 460 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 SLC7A14Q8TBB6 771 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
PDAP1-204ENST00000496335 EDAQ92838 391 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 TMEM206Q9H813 350 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 WDR6Q9NNW5 1121 aaKnown RBP15.7■□□□□ 0.1
PDAP1-204ENST00000496335 RAPGEFL1Q9UHV5 662 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 FBXL5Q9UKA1 691 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 USTQ9Y2C2 406 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 DERAQ9Y315 318 aa15.7■□□□□ 0.1
PDAP1-204ENST00000496335 WDR27A2RRH5 827 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 H7C4K7 107 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 SPTLC1O15269 473 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 ASGR2P07307 311 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 COL9A1P20849 921 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.13e-6■■■□□ 16.3
PDAP1-204ENST00000496335 ZXDAP98168 799 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 EHHADHQ08426 723 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 PTPN21Q16825 1174 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 CTXN3Q4LDR2 81 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 PPM1LQ5SGD2 360 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 C9orf57Q5W0N0 161 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 SLC8B1Q6J4K2 584 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 CYP26C1Q6V0L0 522 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 STXBP4Q6ZWJ1 553 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 EPM2AIP1Q7L775 607 aaPredicted RBP15.69■□□□□ 0.1
PDAP1-204ENST00000496335 APPL2Q8NEU8 664 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 ACSF2Q96CM8 615 aaPredicted RBP15.69■□□□□ 0.1
PDAP1-204ENST00000496335 PAGE5Q96GU1 130 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 FAM84AQ96KN4 292 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 PYM1Q9BRP8 204 aaKnown RBP15.69■□□□□ 0.1
PDAP1-204ENST00000496335 RHOBTB2Q9BYZ6 727 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 GDPD2Q9HCC8 539 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 C2CD2Q9Y426 696 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
PDAP1-204ENST00000496335 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.69■□□□□ 0.1
PDAP1-204ENST00000496335 CLUHO75153 1309 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 NOTCH4Q99466 2003 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 ANO9A1A5B4 782 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 PIRO00625 290 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 CCL16O15467 120 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 ABLIM3O94929 683 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 IL18RAPO95256 599 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 LDHAP00338 332 aaKnown RBP15.68■□□□□ 0.1
PDAP1-204ENST00000496335 LILRA4P59901 499 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 NTHL1P78549 312 aa15.68■□□□□ 0.1
PDAP1-204ENST00000496335 POU5F1Q01860 360 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms