RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CCND2P30279 289 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 MXI1P50539 228 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 KRT76Q01546 638 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 KCTD2Q14681 263 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 PLEKHG4Q58EX7 1191 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 INTS8Q75QN2 995 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 VSIG10LQ86VR7 867 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 C4orf19Q8IY42 314 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 SLC35G2Q8TBE7 412 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 CTNNBL1Q8WYA6 563 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 NFKBIZQ9BYH8 718 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 DDX47Q9H0S4 455 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 THAP2Q9H0W7 228 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 FAM204AQ9H8W3 233 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 KMT5AQ9NQR1 393 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 SEPT9Q9UHD8 586 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 GTF2IRD1Q9UHL9 959 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 PCDHA10Q9Y5I2 948 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 UBE4BO95155 1302 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 GOLGA6BA6NDN3 693 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 RGS20O76081 388 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 SYF2O95926 243 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 CALCAP01258 141 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 FAM153BP0C7A2 387 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 CNGA1P29973 690 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 SMTNP53814 917 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 CDC42EP1Q00587 391 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 PPARDQ03181 441 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 CETN1Q12798 172 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 TRIM32Q13049 653 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 HLTFQ14527 1009 aaKnown RBP eCLIP7.53□□□□□ -1.2
HERC4-211ENST00000492996 CCL14Q16627 93 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 FAM153CQ494X1 144 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 MTERF2Q49AM1 385 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 C10orf76Q5T2E6 689 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 LMBRD2Q68DH5 695 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 CYFIP1Q7L576 1253 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 LRRC57Q8N9N7 239 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 TSEN2Q8NCE0 465 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 AENQ8WTP8 325 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 SCFD2Q8WU76 684 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 BICD1Q96G01 975 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 CEP89Q96ST8 783 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 WNT8AQ9H1J5 351 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 FAM153AQ9UHL3 310 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 FBXL5Q9UKA1 691 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 ADCY6O43306 1168 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 RAD51CO43502 376 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 ITGA4P13612 1032 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 PAX3P23760 479 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 ADSSP30520 456 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 JAK3P52333 1124 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 CNTN2Q02246 1040 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 DMP1Q13316 513 aaPredicted RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 BFSP2Q13515 415 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 LLGL1Q15334 1064 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 NFIL3Q16649 462 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 IFI16Q16666 785 aaKnown RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 C1orf220Q5T0J3 134 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 SWT1Q5T5J6 900 aaKnown RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 EEPD1Q7L9B9 569 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
HERC4-211ENST00000492996 SLC9A9Q8IVB4 645 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 CCDC60Q8IWA6 550 aaPredicted RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 LMO3Q8TAP4 145 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 FAM71BQ8TC56 605 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 NSUN6Q8TEA1 469 aaKnown RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 POMGNT1Q8WZA1 660 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 KAT2BQ92831 832 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 CDHR1Q96JP9 859 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 TMEM117Q9H0C3 514 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 CHRDQ9H2X0 955 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 TBX20Q9UMR3 447 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 COL4A3Q01955 1670 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 HNRNPDLO14979 420 aaKnown RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 ATMINO43313 823 aaPredicted RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 MMP3P08254 477 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 SMPD1P17405 629 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 GTF2BQ00403 316 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 ITIH3Q06033 890 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 SNRNP35Q16560 246 aaKnown RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 TJAP1Q5JTD0 557 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 AP1ARQ63HQ0 302 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 ZNF572Q7Z3I7 529 aaPredicted RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 TMEM161BQ8NDZ6 487 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 OLIG1Q8TAK6 271 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 JPH2Q9BR39 696 aaPredicted RBP7.52□□□□□ -1.21
HERC4-211ENST00000492996 PI4K2AQ9BTU6 479 aa7.52□□□□□ -1.21
HERC4-211ENST00000492996 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
HERC4-211ENST00000492996 AGPSO00116 658 aa7.51□□□□□ -1.21
HERC4-211ENST00000492996 KRIT1O00522 736 aa7.51□□□□□ -1.21
HERC4-211ENST00000492996 CYP26A1O43174 497 aa7.51□□□□□ -1.21
HERC4-211ENST00000492996 FTLP02792 175 aaPredicted RBP7.51□□□□□ -1.21
HERC4-211ENST00000492996 SFNP31947 248 aa7.51□□□□□ -1.21
HERC4-211ENST00000492996 ADGRA3Q8IWK6 1321 aa7.51□□□□□ -1.21
HERC4-211ENST00000492996 IFT20Q8IY31 132 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms