RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CLTAP09496 248 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 MAPTP10636 758 aaKnown RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 LRPAP1P30533 357 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 BRCC3P46736 316 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 ATP2C1P98194 919 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 MCL1Q07820 350 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 SNW1Q13573 536 aaKnown RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 SPECC1Q5M775 1068 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 CYP4A22Q5TCH4 519 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 IQCEQ6IPM2 695 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF280DQ6N043 979 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 C1orf228Q6PIY5 440 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 TAS1R3Q7RTX0 852 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 MAML2Q8IZL2 1156 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 ELMOD1Q8N336 334 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 CEP120Q8N960 986 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 TMEM161BQ8NDZ6 487 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 NELL1Q92832 810 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 AK8Q96MA6 479 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF512Q96ME7 567 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 ZMAT2Q96NC0 199 aaKnown RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 MMTAG2Q9BU76 263 aaKnown RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 PRDM16Q9HAZ2 1276 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 TRPV4Q9HBA0 871 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 GOLGA2P5Q9HBQ8 144 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 LTB4R2Q9NPC1 389 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 HCFC1R1Q9NWW0 138 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 PCDHB8Q9UN66 801 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 PTPRZ1P23471 2315 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF292O60281 2723 aa9.96□□□□□ -0.81
HDAC3-212ENST00000492407 SLC16A4O15374 487 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 CLDN3O15551 220 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 KINO60870 393 aaKnown RBP9.96□□□□□ -0.82
HDAC3-212ENST00000492407 ADRB2P07550 413 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 SDHBP21912 280 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 MARCKSP29966 332 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-212ENST00000492407 EPHA5P54756 1037 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 FAM193AP78312 1265 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 POU5F1Q01860 360 aaKnown RBP9.96□□□□□ -0.82
HDAC3-212ENST00000492407 ADCY1Q08828 1119 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 PLD1Q13393 1074 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 NOLC1Q14978 699 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDAC3-212ENST00000492407 IL17AQ16552 155 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 SLC10A6Q3KNW5 377 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 CTXN3Q4LDR2 81 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 PDZD4Q76G19 769 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-212ENST00000492407 CD302Q8IX05 232 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 BEST2Q8NFU1 509 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 DEPDC1BQ8WUY9 529 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 DDX12PQ92771 950 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 IRF7Q92985 503 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 MCRS1Q96EZ8 462 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 MSANTD3Q96H12 275 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 KIF2CQ99661 725 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 FOXQ1Q9C009 403 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 CYP4F11Q9HBI6 524 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 ZFP14Q9HCL3 533 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 POLD4Q9HCU8 107 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 SPATA6Q9NWH7 488 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-212ENST00000492407 HSFX1Q9UBD0 423 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 ODF2LQ9ULJ1 636 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 INSL5Q9Y5Q6 135 aa9.96□□□□□ -0.82
HDAC3-212ENST00000492407 VPS13AQ96RL7 3174 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 TTC26A0AVF1 554 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 OR6C75A6NL08 312 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 I3L4J1 428 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 FGF19O95750 216 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 PIGRP01833 764 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 FCARP24071 287 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 IGFBP6P24592 240 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-212ENST00000492407 MCM4P33991 863 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 AARSP49588 968 aaKnown RBP eCLIP9.95□□□□□ -0.82
HDAC3-212ENST00000492407 NRLP54845 237 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 SLC12A3P55017 1021 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 NCKAP1LP55160 1127 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 OSTNP61366 133 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 UBXN2BQ14CS0 331 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 RABEP1Q15276 862 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 ZBTB6Q15916 424 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 SLC5A9Q2M3M2 681 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 TANGO2Q6ICL3 276 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 KCNK18Q7Z418 384 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 SUMF1Q8NBK3 374 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 ZBTB44Q8NCP5 570 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 ATRIPQ8WXE1 791 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 SMARCD2Q92925 531 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 TBC1D32Q96NH3 1257 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 ASB16Q96NS5 453 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 PNMA5Q96PV4 448 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 KXD1Q9BQD3 176 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 CORO1BQ9BR76 489 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 TRMT61BQ9BVS5 477 aaKnown RBP9.95□□□□□ -0.82
HDAC3-212ENST00000492407 ZSCAN32Q9NX65 697 aa9.95□□□□□ -0.82
HDAC3-212ENST00000492407 UBQLN1Q9UMX0 589 aaKnown RBP9.95□□□□□ -0.82
HDAC3-212ENST00000492407 ASB3Q9Y575 518 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms