RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 SMIM10L2AP0DMW4 78 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 SMIM10L2BP0DMW5 78 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ATP1A3P13637 1013 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ZNF18P17022 549 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 CCNE1P24864 410 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 KLRC1P26715 233 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 CLCN3P51790 818 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 LBX1P52954 281 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 NCKAP1LP55160 1127 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 PEX3P56589 373 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 RTP1P59025 263 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 IGBP1P78318 339 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 GTF2BQ00403 316 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 MYL5Q02045 173 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 PDE4CQ08493 712 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 C19orf57Q0VDD7 668 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 PPFIA1Q13136 1202 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 PAK1Q13153 545 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 CAPSQ13938 189 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 IKBKEQ14164 716 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ARHGEF6Q15052 776 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 KCNA10Q16322 511 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 CT47A1Q5JQC4 288 aaPredicted RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ZNF484Q5JVG2 852 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ODR4Q5SWX8 454 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ANKRD40Q6AI12 368 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 CENPPQ6IPU0 288 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 MTHFD1LQ6UB35 978 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 RUFY4Q6ZNE9 571 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 LRRC55Q6ZSA7 311 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 APTXQ7Z2E3 356 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 IRF2BP1Q8IU81 584 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 NELFCDQ8IXH7 590 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ZC3H3Q8IXZ2 948 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 MYOCDQ8IZQ8 938 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 TMEM161BQ8NDZ6 487 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 PRPF31Q8WWY3 499 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 KIFAP3Q92845 792 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 KCNN1Q92952 543 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 P2RX5Q93086 422 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 EEF2KMTQ96G04 330 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 DHTKD1Q96HY7 919 aaPredicted RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 DRC1Q96MC2 740 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 CCDC43Q96MW1 224 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 MTG1Q9BT17 334 aaPredicted RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 TIPINQ9BVW5 301 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ST6GALNAC4Q9H4F1 302 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 MRPL44Q9H9J2 332 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 C17orf75Q9HAS0 396 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 SAMSN1Q9NSI8 373 aaKnown RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 FANCLQ9NW38 375 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ARHGAP28Q9P2N2 729 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 HDAC6Q9UBN7 1215 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 SEL1LQ9UBV2 794 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 RWDD2AQ9UIY3 292 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 ZNF215Q9UL58 517 aaPredicted RBP5.34□□□□□ -1.55
EPCAM-206ENST00000490733 NFE2L3Q9Y4A8 694 aa5.34□□□□□ -1.55
EPCAM-206ENST00000490733 NRCAMQ92823 1304 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 K7ENM7 598 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 PSMA7O14818 248 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 GPR182O15218 404 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 EIF3DO15371 548 aaKnown RBP eCLIP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 MAGEB2O15479 319 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 TREHO43280 583 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 HYAL3O43820 417 aaPredicted RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 MSCO60682 206 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 KPNA6O60684 536 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 GCNT3O95395 438 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 IQCF3P0C7M6 154 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 ESRRAP11474 423 aaPredicted RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 CCL5P13501 91 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 NAMPTP43490 491 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 ARL4DP49703 201 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 ACLYP53396 1101 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 CHMP4BP1P59074 171 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 LAMTOR4Q0VGL1 99 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 DMP1Q13316 513 aaPredicted RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 KNOP1Q1ED39 458 aaKnown RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 SLC9C1Q4G0N8 1177 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 HSP90AA4PQ58FG1 418 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 CDKAL1Q5VV42 579 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 SPATA1Q5VX52 437 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 CDCA2Q69YH5 1023 aaPredicted RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 NFRKBQ6P4R8 1299 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 SLC39A4Q6P5W5 647 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 FOXR2Q6PJQ5 311 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 CTU1Q7Z7A3 348 aaKnown RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 KIAA0319LQ8IZA0 1049 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 METTL13Q8N6R0 699 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 ZSWIM2Q8NEG5 633 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 CCDC47Q96A33 483 aaKnown RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 FAM46AQ96IP4 442 aaKnown RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 ZNF333Q96JL9 665 aa5.33□□□□□ -1.56
EPCAM-206ENST00000490733 ZNF668Q96K58 619 aaPredicted RBP5.33□□□□□ -1.56
EPCAM-206ENST00000490733 TCF12Q99081 682 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms