RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IGSF3O75054 1194 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 MT-CO1P00395 513 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 FCER1AP12319 257 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 EDNRBP24530 442 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 PLA2G5P39877 138 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 MTMR1Q13613 665 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 ZNF169Q14929 603 aaPredicted RBP5.13□□□□□ -1.59
HMGN1-218ENST00000490032 PABPC1LQ4VXU2 614 aaKnown RBP5.13□□□□□ -1.59
HMGN1-218ENST00000490032 SP5Q6BEB4 398 aaPredicted RBP5.13□□□□□ -1.59
HMGN1-218ENST00000490032 COLGALT2Q8IYK4 626 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 LNX2Q8N448 690 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 IL17RDQ8NFM7 739 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 TBC1D15Q8TC07 691 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 VOPP1Q96AW1 172 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 TMX3Q96JJ7 454 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 MRGPRX4Q96LA9 322 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 PTGFRNQ9P2B2 879 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHA13Q9Y5I0 950 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 GABRDO14764 452 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 GRM6O15303 877 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 MTHFD1P11586 935 aaKnown RBP5.12□□□□□ -1.59
HMGN1-218ENST00000490032 CDK11BP21127 795 aaKnown RBP5.12□□□□□ -1.59
HMGN1-218ENST00000490032 CDKN1CP49918 316 aaPredicted RBP5.12□□□□□ -1.59
HMGN1-218ENST00000490032 GUCY2FP51841 1108 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 SIM1P81133 766 aaPredicted RBP5.12□□□□□ -1.59
HMGN1-218ENST00000490032 RAB39AQ14964 217 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 ACAP2Q15057 778 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 CCDC142Q17RM4 750 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 GEN1Q17RS7 908 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 ABCB5Q2M3G0 1257 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 RSPH3Q86UC2 560 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 TEKT5Q96M29 485 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 AIFM2Q9BRQ8 373 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 CASS4Q9NQ75 786 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 KCTD5Q9NXV2 234 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 FOXJ2Q9P0K8 574 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.12□□□□□ -1.59
HMGN1-218ENST00000490032 LIMCH1Q9UPQ0 1083 aa5.12□□□□□ -1.59
HMGN1-218ENST00000490032 KAT6AQ92794 2004 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 A0A1W2PS29 197 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 SHTN1A0MZ66 631 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 SLC43A1O75387 559 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 SBK3P0C264 359 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 MYBL2P10244 700 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 RARRES1P49788 294 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 AMPD3Q01432 767 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 C3orf36Q3SXR2 165 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 FBXO42Q6P3S6 717 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 SYCE2Q6PIF2 218 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 RD3Q7Z3Z2 195 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 COA7Q96BR5 231 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 PTCD3Q96EY7 689 aaKnown RBP5.11□□□□□ -1.59
HMGN1-218ENST00000490032 PDLIM2Q96JY6 352 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 DMRTA2Q96SC8 542 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 JKAMPQ9P055 326 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 CALCOCO1Q9P1Z2 691 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 DMTF1Q9Y222 760 aa5.11□□□□□ -1.59
HMGN1-218ENST00000490032 CCDC154A6NI56 674 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 AGFG2O95081 481 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 ZNF280AP59817 542 aaPredicted RBP5.1□□□□□ -1.59
HMGN1-218ENST00000490032 TLE1Q04724 770 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 ITKQ08881 620 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 IL10RAQ13651 578 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 PCBP2Q15366 365 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGN1-218ENST00000490032 ZNF362Q5T0B9 420 aaPredicted RBP5.1□□□□□ -1.59
HMGN1-218ENST00000490032 UTP14CQ5TAP6 766 aaKnown RBP5.1□□□□□ -1.59
HMGN1-218ENST00000490032 KIAA0895LQ68EN5 471 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 PPP4R3AQ6IN85 833 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 SSH3Q8TE77 659 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 TLR10Q9BXR5 811 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 SLC13A1Q9BZW2 595 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 CCDC8Q9H0W5 538 aaPredicted RBP5.1□□□□□ -1.59
HMGN1-218ENST00000490032 VSX1Q9NZR4 365 aaPredicted RBP5.1□□□□□ -1.59
HMGN1-218ENST00000490032 TLK1Q9UKI8 766 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 NEU2Q9Y3R4 380 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHB1Q9Y5F3 818 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 MRFAP1Q9Y605 127 aa5.1□□□□□ -1.59
HMGN1-218ENST00000490032 TRGV11A0A075B6L2 103 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 PRAMEF33A0A0G2JMD5 474 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 ALG1L2C9J202 215 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 MGST3O14880 152 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 XPOTO43592 962 aaKnown RBP5.09□□□□□ -1.59
HMGN1-218ENST00000490032 PRAMEF10O60809 474 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 SRGNP10124 158 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 KCNA2P16389 499 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 CD38P28907 300 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 PTH2RP49190 550 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 ELLP55199 621 aaPredicted RBP5.09□□□□□ -1.59
HMGN1-218ENST00000490032 C21orf58P58505 322 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 MRPS35P82673 323 aaKnown RBP5.09□□□□□ -1.59
HMGN1-218ENST00000490032 FLYWCH1Q4VC44 716 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 COLEC12Q5KU26 742 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.09□□□□□ -1.59
HMGN1-218ENST00000490032 ZNF365Q70YC5 407 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 PRPF38AQ8NAV1 312 aaKnown RBP5.09□□□□□ -1.59
HMGN1-218ENST00000490032 NSUN6Q8TEA1 469 aaKnown RBP5.09□□□□□ -1.59
HMGN1-218ENST00000490032 NELL1Q92832 810 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 KLHL32Q96NJ5 620 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms