RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 RABGGTAQ92696 567 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 CDCA5Q96FF9 252 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 FAM89AQ96GI7 184 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 RPL10LQ96L21 214 aaKnown RBP6.25□□□□□ -1.41
RAB4A-204ENST00000489342 CRAMP1Q96RY5 1269 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 PITHD1Q9GZP4 211 aaPredicted RBP6.25□□□□□ -1.41
RAB4A-204ENST00000489342 SLC6A15Q9H2J7 730 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 IFT22Q9H7X7 185 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 CAAP1Q9H8G2 361 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 SAGE1Q9NXZ1 904 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 GGA3Q9NZ52 723 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 USP18Q9UMW8 372 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 FZD1Q9UP38 647 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 TSC22D4Q9Y3Q8 395 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 BCORQ6W2J9 1755 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
RAB4A-204ENST00000489342 A0A0A6YYJ9 748 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 KDM1AO60341 852 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 NTSR2O95665 410 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
RAB4A-204ENST00000489342 CNGA1P29973 690 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 MSX2P35548 267 aaPredicted RBP6.24□□□□□ -1.41
RAB4A-204ENST00000489342 FXR1P51114 621 aaKnown RBP eCLIP6.24□□□□□ -1.41
RAB4A-204ENST00000489342 HGFACQ04756 655 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 RIN1Q13671 783 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 ACAP1Q15027 740 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 BROXQ5VW32 411 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 RNF180Q86T96 592 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 CDYL2Q8N8U2 506 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 SUPT20HQ8NEM7 779 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 SLC5A5Q92911 643 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 GCC1Q96CN9 775 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 UIMC1Q96RL1 719 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 PCGF6Q9BYE7 350 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 MS4A5Q9H3V2 200 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 PLA2G3Q9NZ20 509 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 NCDNQ9UBB6 729 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 RCAN3Q9UKA8 241 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 MYRFQ9Y2G1 1151 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 PCDHB6Q9Y5E3 794 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 SLC30A1Q9Y6M5 507 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 MAP3K15Q6ZN16 1313 aa6.24□□□□□ -1.41
RAB4A-204ENST00000489342 LCHNA4D1U4 455 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 C2orf78A6NCI8 922 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 ELL2O00472 640 aaPredicted RBP6.23□□□□□ -1.41
RAB4A-204ENST00000489342 ULK1O75385 1050 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 FSBPO95073 299 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 HNRNPLP14866 589 aaKnown RBP eCLIP6.23□□□□□ -1.41
RAB4A-204ENST00000489342 ACO1P21399 889 aaKnown RBP6.23□□□□□ -1.41
RAB4A-204ENST00000489342 ADCY7P51828 1080 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 GPSM2P81274 684 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 ZBTB41Q5SVQ8 909 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 SGMS1Q86VZ5 419 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 D2HGDHQ8N465 521 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 SLC17A8Q8NDX2 589 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 NKD2Q969F2 451 aaPredicted RBP6.23□□□□□ -1.41
RAB4A-204ENST00000489342 WWC2-AS2Q96NR7 200 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 UTP14AQ9BVJ6 771 aaKnown RBP6.23□□□□□ -1.41
RAB4A-204ENST00000489342 MXD3Q9BW11 206 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 TRIM17Q9Y577 477 aa6.23□□□□□ -1.41
RAB4A-204ENST00000489342 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 ZEB2O60315 1214 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 ECE2O60344 883 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 U2AF1L5P0DN76 240 aaPredicted RBP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 CPEP16870 476 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 KRTAP10-2P60368 255 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 U2AF1Q01081 240 aaKnown RBP eCLIP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 FOXL1Q12952 345 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 TAF7Q15545 349 aaPredicted RBP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 FBXO46Q6PJ61 603 aaPredicted RBP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 PPP1R42Q7Z4L9 355 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 GGNQ86UU5 652 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 CXorf67Q86X51 503 aaPredicted RBP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 GPR135Q8IZ08 494 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 ZNF34Q8IZ26 560 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 ARL8AQ96BM9 186 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 ANO3Q9BYT9 981 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 POLLQ9UGP5 575 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 APOBEC2Q9Y235 224 aaKnown RBP6.22□□□□□ -1.41
RAB4A-204ENST00000489342 TAF1P21675 1872 aa6.22□□□□□ -1.41
RAB4A-204ENST00000489342 BRCA2P51587 3418 aa6.21□□□□□ -1.41
RAB4A-204ENST00000489342 AKAP11Q9UKA4 1901 aa6.21□□□□□ -1.41
RAB4A-204ENST00000489342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.21□□□□□ -1.42
RAB4A-204ENST00000489342 PMS2P1A4D2B8 440 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 NEMP1O14524 444 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 NRP2O60462 931 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 BBOX1O75936 387 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 TOX4O94842 621 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 JUNP05412 331 aaKnown RBP6.21□□□□□ -1.42
RAB4A-204ENST00000489342 VSIG10L2P0DP72 767 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 BPIP17213 487 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 MASP1P48740 699 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 NRG3P56975 720 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 DUSP8Q13202 625 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 PKN2Q16513 984 aaKnown RBP6.21□□□□□ -1.42
RAB4A-204ENST00000489342 PROSER3Q2NL68 480 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 SPDYAQ5MJ70 313 aa6.21□□□□□ -1.42
RAB4A-204ENST00000489342 CCDC62Q6P9F0 684 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms