RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 MYH13Q9UKX3 1938 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 RALAP11233 206 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 HSD17B4P51659 736 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 PTENP60484 403 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 GCNT1Q02742 428 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 STAT4Q14765 748 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 ZBED8Q8IZ13 594 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 KLHL29Q96CT2 875 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 IQANK1A0A1B0GTG1 560 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 BTNL10A8MVZ5 291 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 TLR2O60603 784 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 CDH6P55285 790 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 DLG4P78352 724 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 RBP5P82980 135 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 IFRD2Q12894 506 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 SLC29A2Q14542 456 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 NHSL1Q5SYE7 1610 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 BZW1Q7L1Q6 419 aaKnown RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 FAM129AQ9BZQ8 928 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 MLXIPLQ9NP71 852 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 IGLV3-22A0A075B6J6 115 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 HUS1O60921 280 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 CENPCQ03188 943 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 HP1BP3Q5SSJ5 553 aaPredicted RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 CDR2LQ86X02 465 aaPredicted RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 RBM15Q96T37 977 aaKnown RBP eCLIP12.49□□□□□ -0.415e-17■□□□□ 8.9
TRA2B-214ENST00000487615 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 SPATC1LQ9H0A9 340 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 IQCA1LA6NCM1 817 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 MAPK13O15264 365 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 NOL4O94818 638 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 TGFB3P10600 412 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 BRD2P25440 801 aaKnown RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 BCAR1P56945 870 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 PDE1BQ01064 536 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 KIF22Q14807 665 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 P3H1Q32P28 736 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 PHLDB3Q6NSJ2 640 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 METTL7BQ6UX53 244 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 C1orf131Q8NDD1 294 aaKnown RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ARHGEF26Q96DR7 871 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 MTMR12Q9C0I1 747 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 CDH16O75309 829 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ERVK-9P63128 1117 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 C9orf72Q96LT7 481 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 A8MXQ7 604 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ATP9AO75110 1047 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 LCA5LO95447 670 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 PTGER2P43116 358 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 SNCBQ16143 134 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 KLHL38Q2WGJ6 581 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 KDM7AQ6ZMT4 941 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 PPP4R1Q8TF05 950 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 ZNF473Q8WTR7 871 aaKnown RBP12.49□□□□□ -0.41
TRA2B-214ENST00000487615 FOXP3Q9BZS1 431 aa12.49□□□□□ -0.41
TRA2B-214ENST00000487615 GNAT1P11488 350 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 HSPA9P38646 679 aaKnown RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ITGB3BPQ13352 177 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 LRRC14Q15048 493 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 SPOPLQ6IQ16 392 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 CCDC60Q8IWA6 550 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 TRIM42Q8IWZ5 723 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 EPS8L1Q8TE68 723 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 KAT5Q92993 513 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 CFAP36Q96G28 342 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 FAM118BQ9BPY3 351 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 GDF3Q9NR23 364 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 FRMD3A2A2Y4 597 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 PSTPIP1O43586 416 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 LYPLA2O95372 231 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 SLC8A1P32418 973 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 STILQ15468 1287 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 HIF1AQ16665 826 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 HIBCHQ6NVY1 386 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 METTL23Q86XA0 190 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms