RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 OBP2AQ9NY56 170 aa4.56□□□□□ -1.68
SNRNP27-204ENST00000487029 MAP3K2Q9Y2U5 619 aa4.56□□□□□ -1.68
SNRNP27-204ENST00000487029 CCDC194A0A1B0GVG4 234 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 CCDC154A6NI56 674 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 MGST3O14880 152 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 HTRA2O43464 458 aaPredicted RBP4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 AP1G1O43747 822 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 TMEM127O75204 238 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 LTA4HP09960 611 aaKnown RBP4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 EGR2P11161 476 aaPredicted RBP4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 GSPT1P15170 499 aaKnown RBP4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 PDCP20941 246 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 PPP3CAQ08209 521 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 MGAT2Q10469 447 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 ERCC6LQ2NKX8 1250 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 ARHGAP29Q52LW3 1261 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 B3GNT9Q6UX72 402 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 USP45Q70EL2 814 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 DGKHQ86XP1 1220 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 CCDC146Q8IYE0 955 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 MSL3Q8N5Y2 521 aaKnown RBP4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 GPR156Q8NFN8 814 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 SLC35G2Q8TBE7 412 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 RIN2Q8WYP3 895 aaPredicted RBP4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 HPS3Q969F9 1004 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 RUNDC1Q96C34 613 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 IL17RAQ96F46 866 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 TAAR9Q96RI9 348 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 MAP3K14Q99558 947 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 DMRT3Q9NQL9 472 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 TLK1Q9UKI8 766 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 LIMCH1Q9UPQ0 1083 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 IPPQ9Y573 584 aa4.55□□□□□ -1.68
SNRNP27-204ENST00000487029 RPTORQ8N122 1335 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 LRRC3CA6NJW4 275 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 FAM171A2A8MVW0 826 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 NRP1O14786 923 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 PHF2O75151 1096 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 KRT18P05783 430 aaKnown RBP4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 EDNRBP24530 442 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 CTSSP25774 331 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 DDX6P26196 483 aaKnown RBP eCLIP4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 ABCG1P45844 678 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 GBX1Q14549 363 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 ZNF267Q14586 743 aaPredicted RBP4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 ANKS6Q68DC2 871 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 MIGA2Q7L4E1 593 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 TAS1R1Q7RTX1 841 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 PLXDC1Q8IUK5 500 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 PRR18Q8N4B5 295 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 SLC44A3Q8N4M1 653 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 ZNF384Q8TF68 577 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 HDAC10Q969S8 669 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 MVB12AQ96EY5 273 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 C1orf112Q9NSG2 853 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 INTUQ9ULD6 942 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 HDAC5Q9UQL6 1122 aa4.54□□□□□ -1.68
SNRNP27-204ENST00000487029 MARCH11A6NNE9 402 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 AKR1B10O60218 316 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 CTNND1O60716 968 aaKnown RBP4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 PRAMEF4O60810 478 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 GZMKP49863 264 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 NHLH1Q02575 133 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 SCAPQ12770 1279 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 NOMO1Q15155 1222 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 UBE3CQ15386 1083 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 PGS1Q32NB8 556 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 C19orf54Q5BKX5 351 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 ABHD17BQ5VST6 288 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 METRNLQ641Q3 311 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 SLC4A10Q6U841 1118 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 ABHD15Q6UXT9 468 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 CCAR1Q8IX12 1150 aaKnown RBP4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 DIS3LQ8TF46 1054 aaKnown RBP4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 DPF2Q92785 391 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 C1GALT1C1Q96EU7 318 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 NEU1Q99519 415 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 C7orf25Q9BPX7 421 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 SPON1Q9HCB6 807 aa4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 CFAP20Q9Y6A4 193 aaKnown RBP4.53□□□□□ -1.68
SNRNP27-204ENST00000487029 CGB1A6NKQ9 187 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ENDOD1O94919 500 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 MYL1P05976 194 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ITGAMP11215 1152 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ECHS1P30084 290 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 FXR1P51114 621 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 WNT3AP56704 352 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 SIM1P81133 766 aaPredicted RBP4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 RESTQ13127 1097 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 MPP3Q13368 585 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 GRM3Q14832 879 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 SEPT2Q15019 361 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 MST1LQ2TV78 715 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 PPP4R3AQ6IN85 833 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 C1QL2Q7Z5L3 287 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ARHGEF25Q86VW2 580 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 OR10H5Q8NGA6 315 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms