RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 BEST2Q8NFU1 509 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 NOC3LQ8WTT2 800 aaKnown RBP19.99■□□□□ 0.79
COL1A1-206ENST00000485870 HDAC7Q8WUI4 952 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 SUSD3Q96L08 255 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 TSPAN18Q96SJ8 248 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 CBWD1Q9BRT8 395 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 C1QTNF1Q9BXJ1 281 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 PCIF1Q9H4Z3 704 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 FBXW11Q9UKB1 542 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 NR2E1Q9Y466 385 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-206ENST00000485870 GOLGA8IPA6NC78 632 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 FAM86C2PA6NEL3 165 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 GOLGA8JA6NMD2 632 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 C2CD4DB7Z1M9 353 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 PPEF2O14830 753 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 SYN3O14994 580 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 ACTN4O43707 911 aaKnown RBP19.98■□□□□ 0.79
COL1A1-206ENST00000485870 SLFN14P0C7P3 912 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 GARTP22102 1010 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 LIN9Q5TKA1 542 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 CCDC149Q6ZUS6 474 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 SMG7Q92540 1137 aaKnown RBP19.98■□□□□ 0.79
COL1A1-206ENST00000485870 SCAND2PQ9GZW5 306 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-206ENST00000485870 ASB7Q9H672 318 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 GDPD2Q9HCC8 539 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 DERAQ9Y315 318 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 BACE2Q9Y5Z0 518 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 DENND4AQ7Z401 1863 aa19.98■□□□□ 0.79
COL1A1-206ENST00000485870 RAB33AQ14088 237 aa19.97■□□□□ 0.79
COL1A1-206ENST00000485870 ARMCX5Q6P1M9 558 aa19.97■□□□□ 0.79
COL1A1-206ENST00000485870 TDRD5Q8NAT2 981 aaKnown RBP19.97■□□□□ 0.79
COL1A1-206ENST00000485870 ZNF707Q96C28 371 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-206ENST00000485870 PIDD1Q9HB75 910 aa19.97■□□□□ 0.79
COL1A1-206ENST00000485870 ZDHHC7Q9NXF8 308 aa19.97■□□□□ 0.79
COL1A1-206ENST00000485870 PCDHB8Q9UN66 801 aa19.97■□□□□ 0.79
COL1A1-206ENST00000485870 EIF3DO15371 548 aaKnown RBP eCLIP19.96■□□□□ 0.79
COL1A1-206ENST00000485870 ZMYND10O75800 440 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 C8AP07357 584 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 ARPP19P56211 112 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 POU5F1Q01860 360 aaKnown RBP19.96■□□□□ 0.79
COL1A1-206ENST00000485870 CTXN3Q4LDR2 81 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 DSTYKQ6XUX3 929 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 EPM2AIP1Q7L775 607 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-206ENST00000485870 EFCAB13Q8IY85 973 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 APPL2Q8NEU8 664 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 PAGE5Q96GU1 130 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 RBAKQ9NYW8 714 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-206ENST00000485870 HPSEQ9Y251 543 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 C2CD2Q9Y426 696 aa19.96■□□□□ 0.79
COL1A1-206ENST00000485870 TIMM13Q9Y5L4 95 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-206ENST00000485870 PVALEFA0A1B0GWK0 134 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 H7C4K7 107 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 EXTL3O43909 919 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 IL18RAPO95256 599 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 LDHAP00338 332 aaKnown RBP19.95■□□□□ 0.78
COL1A1-206ENST00000485870 HOXD13P35453 343 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 SYKP43405 635 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 NDUFA8P51970 172 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 WNT7BP56706 349 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 ROR1Q01973 937 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 EHHADHQ08426 723 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 MRPL58Q14197 206 aaKnown RBP19.95■□□□□ 0.78
COL1A1-206ENST00000485870 TMEM31Q5JXX7 168 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 PPM1LQ5SGD2 360 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 C9orf57Q5W0N0 161 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 SLC8B1Q6J4K2 584 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 CYP26C1Q6V0L0 522 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 BRSK2Q8IWQ3 736 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 NELFCDQ8IXH7 590 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 FSIP1Q8NA03 581 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 SLC7A14Q8TBB6 771 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 ZNF507Q8TCN5 953 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 PRKD2Q9BZL6 878 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 SLC39A2Q9NP94 309 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 C11orf16Q9NQ32 467 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 USP25Q9UHP3 1055 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 FBXL5Q9UKA1 691 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 SCN1AP35498 2009 aa19.95■□□□□ 0.78
COL1A1-206ENST00000485870 TRIOO75962 3097 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 DOCK6Q96HP0 2047 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 M0QZQ0 153 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 AARSP49588 968 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL1A1-206ENST00000485870 NUCB2P80303 420 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 ZNF280DQ6N043 979 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 GPD1LQ8N335 351 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 RHOBTB2Q9BYZ6 727 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 WDR6Q9NNW5 1121 aaKnown RBP19.94■□□□□ 0.78
COL1A1-206ENST00000485870 DPP3Q9NY33 737 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 MYO10Q9HD67 2058 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 CLUHO75153 1309 aa19.94■□□□□ 0.78
COL1A1-206ENST00000485870 WDR27A2RRH5 827 aa19.93■□□□□ 0.78
COL1A1-206ENST00000485870 PIRO00625 290 aa19.93■□□□□ 0.78
COL1A1-206ENST00000485870 SPTLC1O15269 473 aa19.93■□□□□ 0.78
COL1A1-206ENST00000485870 CCL16O15467 120 aa19.93■□□□□ 0.78
COL1A1-206ENST00000485870 TBC1D4O60343 1298 aa19.93■□□□□ 0.78
COL1A1-206ENST00000485870 LILRA4P59901 499 aa19.93■□□□□ 0.78
COL1A1-206ENST00000485870 TFAMQ00059 246 aaKnown RBP19.93■□□□□ 0.78
COL1A1-206ENST00000485870 YWHAHQ04917 246 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms