RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 EFCAB13Q8IY85 973 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 BEST2Q8NFU1 509 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 DIS3LQ8TF46 1054 aaKnown RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 TMEM40Q8WWA1 233 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 TAF4BQ92750 862 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 FAM84AQ96KN4 292 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 APOL6Q9BWW8 343 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 EIF2AQ9BY44 585 aaKnown RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 SENP6Q9GZR1 1112 aaPredicted RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 TRMT13Q9NUP7 481 aaKnown RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 ADAMTS1Q9UHI8 967 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 GUCA1BQ9UMX6 200 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 PHF24Q9UPV7 400 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 DERAQ9Y315 318 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 C2CD2Q9Y426 696 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 ARVCFO00192 962 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 DNM1LO00429 736 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 LCA5LO95447 670 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 ASS1P00966 412 aaKnown RBP10.23□□□□□ -0.77
CTSA-208ENST00000485627 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
CTSA-208ENST00000485627 CHRNA1P02708 482 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 SYN1P17600 705 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 CASQ1P31415 396 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 ATICP31939 592 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 MYL6P60660 151 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 ETF1P62495 437 aaKnown RBP10.23□□□□□ -0.77
CTSA-208ENST00000485627 RBP5P82980 135 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 MGAT3Q09327 533 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 PAK2Q13177 524 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 CUL2Q13617 745 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 SPOPLQ6IQ16 392 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 SYT10Q6XYQ8 523 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 ZNF662Q6ZS27 426 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 FAM71AQ8IYT1 594 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 SHC3Q92529 594 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 DHX38Q92620 1227 aaKnown RBP10.23□□□□□ -0.77
CTSA-208ENST00000485627 KAT5Q92993 513 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 KREMEN1Q96MU8 473 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 GPR88Q9GZN0 384 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 MYO1AQ9UBC5 1043 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 DNAI1Q9UI46 699 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 ITGA11Q9UKX5 1188 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 ST3GAL5Q9UNP4 418 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 REXO2Q9Y3B8 237 aaKnown RBP10.23□□□□□ -0.77
CTSA-208ENST00000485627 PAXBP1Q9Y5B6 917 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 PCDHB4Q9Y5E5 795 aa10.23□□□□□ -0.77
CTSA-208ENST00000485627 A0A087X0T9 212 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 RBAK-RBAKDNI3L0D1 243 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 TLR3O15455 904 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 CYP26A1O43174 497 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 RECQL4O94761 1208 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 SGPL1O95470 568 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 ITGB3P05106 788 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 FAM228BP0C875 321 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 GHRP10912 638 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 NAP1L1P55209 391 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 MYO1EQ12965 1108 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 ZNF667Q5HYK9 610 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 ZNF569Q5MCW4 686 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 ALKBH5Q6P6C2 394 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 C7orf61Q8IZ16 206 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 RPUSD2Q8IZ73 545 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 C1orf127Q8N9H9 656 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 USP38Q8NB14 1042 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 SLC43A3Q8NBI5 491 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 WNT8BQ93098 351 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 FAXDC2Q96IV6 333 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 SNX27Q96L92 541 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 AGPAT1Q99943 283 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 NIF3L1Q9GZT8 377 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 TRPV6Q9H1D0 765 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 PDCL3Q9H2J4 239 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 NXF3Q9H4D5 531 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 APOBEC3GQ9HC16 384 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 PAK6Q9NQU5 681 aaPredicted RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 MTMR10Q9NXD2 777 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 DPP3Q9NY33 737 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 UBQLN1Q9UMX0 589 aaKnown RBP10.22□□□□□ -0.77
CTSA-208ENST00000485627 AGAP1Q9UPQ3 857 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 IPPQ9Y573 584 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 NUB1Q9Y5A7 615 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 SQORQ9Y6N5 450 aa10.22□□□□□ -0.77
CTSA-208ENST00000485627 ALPK3Q96L96 1907 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 TRIP12Q14669 1992 aaPredicted RBP10.21□□□□□ -0.77
CTSA-208ENST00000485627 ZNF263O14978 683 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 TACC1O75410 805 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 CD4P01730 458 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 TFRCP02786 760 aaKnown RBP10.21□□□□□ -0.77
CTSA-208ENST00000485627 H2AFZP0C0S5 128 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 CKBP12277 381 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 SKIP12755 728 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 ITGA4P13612 1032 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 ATF7P17544 494 aaPredicted RBP10.21□□□□□ -0.77
CTSA-208ENST00000485627 AKAP5P24588 427 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 POLR2BP30876 1174 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms