RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 GTF2F1P35269 517 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL2A1-206ENST00000483376 PRCPP42785 496 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 CYP2J2P51589 502 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 CLDN10P78369 228 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 MORC3Q14149 939 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 ANKS3Q6ZW76 656 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 RBM23Q86U06 439 aaKnown RBP17.6■□□□□ 0.41
COL2A1-206ENST00000483376 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL2A1-206ENST00000483376 ADSSL1Q8N142 457 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 CXorf38Q8TB03 319 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
COL2A1-206ENST00000483376 SLC22A17Q8WUG5 538 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 AUTS2Q8WXX7 1259 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 CASP10Q92851 521 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 MSLNLQ96KJ4 702 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 INTS13Q9NVM9 706 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 DPP3Q9NY33 737 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 CLDND1Q9NY35 253 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 KIAA1468Q9P260 1216 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 MAN1B1Q9UKM7 699 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 ITGA11Q9UKX5 1188 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 BACE2Q9Y5Z0 518 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 HCFC2Q9Y5Z7 792 aa17.6■□□□□ 0.41
COL2A1-206ENST00000483376 ARHGEF37A1IGU5 675 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 TEX28O15482 410 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 TBX10O75333 385 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 CSPG5O95196 566 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 PAPLNO95428 1278 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 HOXB8P17481 243 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 RPL13P26373 211 aaKnown RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 PNPLA4P41247 253 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 NDUFV1P49821 464 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 CLCN4P51793 760 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 LILRA4P59901 499 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 MRPS5P82675 430 aaKnown RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 LRRC63Q05C16 580 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 MRPL58Q14197 206 aaKnown RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 DUOXA2Q1HG44 320 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 PUS10Q3MIT2 529 aaKnown RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 ZC3H3Q8IXZ2 948 aaKnown RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 LRRC52Q8N7C0 313 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 C1orf127Q8N9H9 656 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 APPL2Q8NEU8 664 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 VN1R2Q8NFZ6 395 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 HDAC7Q8WUI4 952 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 RIN2Q8WYP3 895 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 OXCT2Q9BYC2 517 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-206ENST00000483376 CLSTN2Q9H4D0 955 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 PRDM6Q9NQX0 595 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 DZANK1Q9NVP4 752 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 CLEC1BQ9P126 229 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 MTRRQ9UBK8 725 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 PCDHB8Q9UN66 801 aa17.59■□□□□ 0.41
COL2A1-206ENST00000483376 VCANP13611 3396 aa17.58■□□□□ 0.41
COL2A1-206ENST00000483376 LINC01565O15544 149 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 TYMPP19971 482 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 MCM4P33991 863 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 BRCC3P46736 316 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 GUCY2FP51841 1108 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 AP3M2P53677 418 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 TFAMQ00059 246 aaKnown RBP17.58■□□□□ 0.4
COL2A1-206ENST00000483376 STIM1Q13586 685 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 SMYD4Q8IYR2 804 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-206ENST00000483376 TMC2Q8TDI7 906 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 ERCC4Q92889 916 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-206ENST00000483376 DHTKD1Q96HY7 919 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-206ENST00000483376 ANKRD36BP1Q96IX9 119 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 ZNF560Q96MR9 790 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 CGRRF1Q99675 332 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 MKNK1Q9BUB5 465 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-206ENST00000483376 IGFLR1Q9H665 355 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 DPP7Q9UHL4 492 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 MAPK8IP1Q9UQF2 711 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 FRMD4BQ9Y2L6 1034 aa17.58■□□□□ 0.4
COL2A1-206ENST00000483376 VWA8A3KMH1 1905 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 C2CD2LO14523 706 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 PSMA7O14818 248 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 TBC1D4O60343 1298 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 OAZ2O95190 189 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 CYP11A1P05108 521 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 TMEM191BP0C7N4 346 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 BMP6P22004 513 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 KCNA5P22460 613 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 NR2F2P24468 414 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 TKTP29401 623 aaKnown RBP17.57■□□□□ 0.4
COL2A1-206ENST00000483376 TAF6P49848 677 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 PSMD5Q16401 504 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 SLC8B1Q6J4K2 584 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 LILRA6Q6PI73 481 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 USP37Q86T82 979 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 SMRP1Q8NCR6 262 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 PARD3BQ8TEW8 1205 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 BORCS6Q96GS4 357 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 B3GALT6Q96L58 329 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 ASB2Q96Q27 587 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 FNBP1Q96RU3 617 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 CLSTN3Q9BQT9 956 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 RHOBTB2Q9BYZ6 727 aa17.57■□□□□ 0.4
COL2A1-206ENST00000483376 PTPRJQ12913 1337 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms