RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ZBTB41Q5SVQ8 909 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 C1orf186Q6ZWK4 172 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 DGLUCYQ7Z3D6 616 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 GPIHBP1Q8IV16 184 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 DRC1Q96MC2 740 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 TBC1D32Q96NH3 1257 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 HAPLN2Q9GZV7 340 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 SLC38A7Q9NVC3 462 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 CEP72Q9P209 647 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 NCDNQ9UBB6 729 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 DNM3Q9UQ16 869 aa15.21■□□□□ 0.03
VARS-226ENST00000483275 TIMM13Q9Y5L4 95 aaPredicted RBP15.21■□□□□ 0.03
VARS-226ENST00000483275 EPG5Q9HCE0 2579 aa15.21■□□□□ 0.02
VARS-226ENST00000483275 VNN2O95498 520 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 MYL4P12829 197 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 CPB1P15086 417 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 ATF2P15336 505 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 TRAPPC10P48553 1259 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 TWF1Q12792 350 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 MTAPQ13126 283 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 NOLC1Q14978 699 aaKnown RBP eCLIP15.2■□□□□ 0.02
VARS-226ENST00000483275 SLC10A6Q3KNW5 377 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 KRT79Q5XKE5 535 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 VITQ6UXI7 678 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 RNF19BQ6ZMZ0 732 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 PDZD4Q76G19 769 aaPredicted RBP15.2■□□□□ 0.02
VARS-226ENST00000483275 TCEAL8Q8IYN2 117 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 ELSPBP1Q96BH3 223 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 PGLYRP2Q96PD5 576 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 TMEM134Q9H6X4 195 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 BRD9Q9H8M2 597 aa15.2■□□□□ 0.02
VARS-226ENST00000483275 SMG5Q9UPR3 1016 aaKnown RBP15.2■□□□□ 0.02
VARS-226ENST00000483275 H7C4K7 107 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 SYN3O14994 580 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 MOSPD3O75425 235 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 U2AF2P26368 475 aaKnown RBP eCLIP15.19■□□□□ 0.02
VARS-226ENST00000483275 TNFSF9P41273 254 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 MATR3P43243 847 aaKnown RBP eCLIP15.19■□□□□ 0.02
VARS-226ENST00000483275 HMGN5P82970 282 aaKnown RBP15.19■□□□□ 0.02
VARS-226ENST00000483275 FZD5Q13467 585 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 MRPL58Q14197 206 aaKnown RBP15.19■□□□□ 0.02
VARS-226ENST00000483275 LPAL2Q16609 132 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 RSPO4Q2I0M5 234 aaPredicted RBP15.19■□□□□ 0.02
VARS-226ENST00000483275 ZNF280DQ6N043 979 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 ZNF852Q6ZMS4 543 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 TTC9BQ8N6N2 239 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 ATRIPQ8WXE1 791 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 DDX12PQ92771 950 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 CLDN23Q96B33 292 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 ASB16Q96NS5 453 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 PNMA5Q96PV4 448 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 KIF2CQ99661 725 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 CRISPLD1Q9H336 500 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 AVENQ9NQS1 362 aaPredicted RBP15.19■□□□□ 0.02
VARS-226ENST00000483275 FBXO4Q9UKT5 387 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 TCHHQ07283 1943 aa15.19■□□□□ 0.02
VARS-226ENST00000483275 TPRP12270 2363 aaKnown RBP15.19■□□□□ 0.02
VARS-226ENST00000483275 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
VARS-226ENST00000483275 PPEF2O14830 753 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
VARS-226ENST00000483275 GDI1P31150 447 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 PDIA5Q14554 519 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 TEAD2Q15562 447 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 ZNF528Q3MIS6 628 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 STXBP5Q5T5C0 1151 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 MCTP1Q6DN14 999 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 SHKBP1Q8TBC3 707 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 RSPRY1Q96DX4 576 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 OSBPL6Q9BZF3 934 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 RAB34Q9BZG1 259 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 SLITRK6Q9H5Y7 841 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 PRMT8Q9NR22 394 aaPredicted RBP15.18■□□□□ 0.02
VARS-226ENST00000483275 ZSCAN32Q9NX65 697 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 YIPF1Q9Y548 306 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 PCDHGA2Q9Y5H1 932 aa15.18■□□□□ 0.02
VARS-226ENST00000483275 SCN1AP35498 2009 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 CHD8Q9HCK8 2581 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 SPTLC1O15269 473 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 SOAT2O75908 522 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 PLS3P13797 630 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 RPL9P32969 192 aaKnown RBP15.17■□□□□ 0.02
VARS-226ENST00000483275 SOX9P48436 509 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 STRN3Q13033 797 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 CYP4A22Q5TCH4 519 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 RTL10Q7L3V2 364 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 ZNF687Q8N1G0 1237 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 TTC8Q8TAM2 541 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 ZSCAN18Q8TBC5 510 aaPredicted RBP15.17■□□□□ 0.02
VARS-226ENST00000483275 KIF12Q96FN5 646 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 BICD1Q96G01 975 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 TRMT61BQ9BVS5 477 aaKnown RBP15.17■□□□□ 0.02
VARS-226ENST00000483275 ASAH2Q9NR71 780 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.17■□□□□ 0.02
VARS-226ENST00000483275 AFF4Q9UHB7 1163 aaKnown RBP15.17■□□□□ 0.02
VARS-226ENST00000483275 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms