RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SORCS3Q9UPU3 1222 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-239ENST00000483086 H0YCG3 227 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 M0QZQ0 153 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 ABLIM3O94929 683 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 YEATS4O95619 227 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
HDLBP-239ENST00000483086 CREMQ03060 361 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
HDLBP-239ENST00000483086 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 RPP25Q9BUL9 199 aaKnown RBP13.14□□□□□ -0.31
HDLBP-239ENST00000483086 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
HDLBP-239ENST00000483086 KCNG1Q9UIX4 513 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
HDLBP-239ENST00000483086 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 OBSL1O75147 1896 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 PRPF6O94906 941 aaKnown RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 OR4Q2P0C623 313 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 IDEP14735 1019 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 MCM4P33991 863 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 PLA2G5P39877 138 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 SPATA1Q5VX52 437 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 GET4Q7L5D6 327 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 OTOP3Q7RTS5 596 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 DHX58Q96C10 678 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 TMEM209Q96SK2 561 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 TRIM9Q9C026 710 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 MRPL44Q9H9J2 332 aaKnown RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
HDLBP-239ENST00000483086 COL4A2P08572 1712 aa13.13□□□□□ -0.31
HDLBP-239ENST00000483086 FRYLO94915 3013 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PIRO00625 290 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 SYN3O14994 580 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 GCNT3O95395 438 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 LAMP2P13473 410 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 CYP3A5P20815 502 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-239ENST00000483086 TXLNAP40222 546 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 CDR1P51861 262 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 ARPP19P56211 112 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 C9orf57Q5W0N0 161 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 CXorf38Q8TB03 319 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 FGF14Q92915 247 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 BORCS6Q96GS4 357 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PHOX2BQ99453 314 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 HCN4Q9Y3Q4 1203 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
HDLBP-239ENST00000483086 PIEZO1Q92508 2521 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 ANHXE9PGG2 379 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 CUTAO60888 179 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 HNRNPA1P09651 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDLBP-239ENST00000483086 NPR3P17342 541 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 GAP43P17677 238 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 HOXA9P31269 272 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 CCR2P41597 374 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 LILRA4P59901 499 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 EHHADHQ08426 723 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 TCF15Q12870 199 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 HTR4Q13639 388 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
HDLBP-239ENST00000483086 PDXDC1Q6P996 788 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 PARM1Q6UWI2 310 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
HDLBP-239ENST00000483086 ACSF2Q96CM8 615 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms