RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 C17orf113A0A1B0GUU1 675 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 A0A1B0GX30 115 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 ANKRD18BA2A2Z9 1011 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 GTPBP10A4D1E9 387 aaKnown RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 F8W031 263 aaPredicted RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 RPS6KB1P23443 525 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 GRK2P25098 689 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 YARSP54577 528 aaKnown RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 ARL4CP56559 192 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 NRG1Q02297 640 aaPredicted RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 ID3Q02535 119 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 FAPQ12884 760 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 DUOXA2Q1HG44 320 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SULT6B1Q6IMI4 303 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SHISA2Q6UWI4 295 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 MGARPQ8TDB4 240 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 KCNG4Q8TDN1 519 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 ZBED3Q96IU2 234 aaPredicted RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 GBP3Q9H0R5 595 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 MSRAQ9UJ68 235 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 MAGED2Q9UNF1 606 aaPredicted RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 PLXNA3P51805 1871 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SYNGAP1Q96PV0 1343 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 RTCAO00442 366 aaKnown RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 NKRFO15226 690 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMC6-208ENST00000481708 MAFKO60675 156 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SGPL1O95470 568 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SLC4A1P02730 911 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 ADH5P11766 374 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 NPR1P16066 1061 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 VCAM1P19320 739 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 EEF1GP26641 437 aaKnown RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 CD86P42081 329 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 CACNB3P54284 484 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 LACTBP83111 547 aaPredicted RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 FOXO1Q12778 655 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 TTLL4Q14679 1199 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 TBCCQ15814 346 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 HECTD3Q5T447 861 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 CRTC3Q6UUV7 619 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SYTL1Q8IYJ3 562 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 AGGF1Q8N302 714 aaeCLIP3.77□□□□□ -1.81
SMC6-208ENST00000481708 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.77□□□□□ -1.815e-12■■■■□ 21.7
SMC6-208ENST00000481708 C16orf92Q96LL3 132 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 TRMT1Q9NXH9 659 aaKnown RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 CLEC1BQ9P126 229 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 FBLN5Q9UBX5 448 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 NOC2LQ9Y3T9 749 aaKnown RBP3.77□□□□□ -1.81
SMC6-208ENST00000481708 MEIS1O00470 390 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 APOL1O14791 398 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 ARHGEF15O94989 841 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 TIAF1O95411 115 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 CLTBP09497 229 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 RARBP10826 455 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SNX16P57768 344 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 IRF9Q00978 393 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 FBXO47Q5MNV8 452 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 TEX11Q8IYF3 940 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 GALNT15Q8N3T1 639 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 KCNC2Q96PR1 638 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 JAM3Q9BX67 310 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 PLVAPQ9BX97 442 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMC6-208ENST00000481708 RRAGCQ9HB90 399 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 FAM105AQ9NUU6 356 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 SNX13Q9Y5W8 968 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 ST14Q9Y5Y6 855 aa3.77□□□□□ -1.81
SMC6-208ENST00000481708 EIF4EBP3O60516 100 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 NDST3O95803 873 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 SLC3A2P08195 630 aaKnown RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 LORP23490 312 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 HOXA10P31260 410 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 PSMC6P62333 389 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 POMZP3Q6PJE2 187 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ACAD11Q709F0 780 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 IPO4Q8TEX9 1081 aaKnown RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 ZNF775Q96BV0 537 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 CHMP4BQ9H444 224 aaKnown RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 SUGCTQ9HAC7 445 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 SCOCQ9UIL1 159 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 TELO2Q9Y4R8 837 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 CARMIL3Q8ND23 1372 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ADGRA2Q96PE1 1338 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 COBLO75128 1261 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PRAMEF1O95521 474 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 SLFN14P0C7P3 912 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 KITP10721 976 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ITGA4P13612 1032 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PSMA3P25788 255 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PPP5CP53041 499 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 DAG1Q14118 895 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PPP2R5BQ15173 497 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 TMEM132EQ6IEE7 984 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 C2orf69Q8N8R5 385 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 DTWD2Q8NBA8 298 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 RNF214Q8ND24 703 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 BRI3BPQ8WY22 251 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ERCC4Q92889 916 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 POFUT1Q9H488 388 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms