RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 SUSD3Q96L08 255 aa20.33■□□□□ 0.85
HSPG2-210ENST00000481644 FAM213AQ9BRX8 229 aa20.33■□□□□ 0.85
HSPG2-210ENST00000481644 ASB7Q9H672 318 aa20.33■□□□□ 0.85
HSPG2-210ENST00000481644 FBXW11Q9UKB1 542 aa20.33■□□□□ 0.85
HSPG2-210ENST00000481644 NR2E1Q9Y466 385 aa20.33■□□□□ 0.85
HSPG2-210ENST00000481644 BACE2Q9Y5Z0 518 aa20.33■□□□□ 0.85
HSPG2-210ENST00000481644 EIF3DO15371 548 aaKnown RBP eCLIP20.32■□□□□ 0.84
HSPG2-210ENST00000481644 DCXO43602 365 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 ACTN4O43707 911 aaKnown RBP20.32■□□□□ 0.84
HSPG2-210ENST00000481644 RFPL2O75678 378 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 LDHAP00338 332 aaKnown RBP20.32■□□□□ 0.84
HSPG2-210ENST00000481644 ALADP13716 330 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 OR1D2P34982 312 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 NUCB2P80303 420 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 CUL4BQ13620 913 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 VARS2Q5ST30 1063 aaKnown RBP20.32■□□□□ 0.84
HSPG2-210ENST00000481644 ARMCX5Q6P1M9 558 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 C1QTNF1Q9BXJ1 281 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 USP25Q9UHP3 1055 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 C2CD2Q9Y426 696 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 CDY1Q9Y6F8 540 aa20.32■□□□□ 0.84
HSPG2-210ENST00000481644 PVALEFA0A1B0GWK0 134 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 IL18RAPO95256 599 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 RAB33AQ14088 237 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 LIN9Q5TKA1 542 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 CYP26C1Q6V0L0 522 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 NOC3LQ8WTT2 800 aaKnown RBP20.31■□□□□ 0.84
HSPG2-210ENST00000481644 PAGE5Q96GU1 130 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 CBWD1Q9BRT8 395 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 PCIF1Q9H4Z3 704 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 GDPD2Q9HCC8 539 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 ZDHHC7Q9NXF8 308 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 MUTYHQ9UIF7 546 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 PCDHB8Q9UN66 801 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 HPSEQ9Y251 543 aa20.31■□□□□ 0.84
HSPG2-210ENST00000481644 GOLGA8IPA6NC78 632 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 GOLGA8JA6NMD2 632 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 H7C4K7 107 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-210ENST00000481644 ZMYND10O75800 440 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 SYKP43405 635 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 EHHADHQ08426 723 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 RSPO2Q6UXX9 243 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-210ENST00000481644 CCDC149Q6ZUS6 474 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 EPM2AIP1Q7L775 607 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-210ENST00000481644 ZSWIM2Q8NEG5 633 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 APPL2Q8NEU8 664 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 ZNF507Q8TCN5 953 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 SMG7Q92540 1137 aaKnown RBP20.3■□□□□ 0.84
HSPG2-210ENST00000481644 RHOBTB2Q9BYZ6 727 aa20.3■□□□□ 0.84
HSPG2-210ENST00000481644 UBE4BO95155 1302 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 A0A1W2PQ27 194 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 A0A1W2PQ64 194 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 A0A1W2PQD8 194 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 C2CD4DB7Z1M9 353 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 M0QZQ0 153 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 PPEF2O14830 753 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 EXTL3O43909 919 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 HOXD13P35453 343 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 NDUFA8P51970 172 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 DSTYKQ6XUX3 929 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 BRSK2Q8IWQ3 736 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 EFCAB13Q8IY85 973 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 FSIP1Q8NA03 581 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 TDRD5Q8NAT2 981 aaKnown RBP20.29■□□□□ 0.84
HSPG2-210ENST00000481644 ZNF707Q96C28 371 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-210ENST00000481644 PIDD1Q9HB75 910 aa20.29■□□□□ 0.84
HSPG2-210ENST00000481644 RBAKQ9NYW8 714 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-210ENST00000481644 FAM237AA0A1B0GTK4 181 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 KIAA0391O15091 583 aaKnown RBP20.28■□□□□ 0.84
HSPG2-210ENST00000481644 PAPLNO95428 1278 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 C8AP07357 584 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 AARSP49588 968 aaKnown RBP eCLIP20.28■□□□□ 0.841e-9■■□□□ 11.6
HSPG2-210ENST00000481644 ROR1Q01973 937 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 MRPL58Q14197 206 aaKnown RBP20.28■□□□□ 0.84
HSPG2-210ENST00000481644 CTXN3Q4LDR2 81 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 SLC8B1Q6J4K2 584 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 ZNF280DQ6N043 979 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 NT5DC4Q86YG4 428 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 NELFCDQ8IXH7 590 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 GPD1LQ8N335 351 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 PRKD2Q9BZL6 878 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 SLC39A2Q9NP94 309 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 DPP3Q9NY33 737 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 USTQ9Y2C2 406 aa20.28■□□□□ 0.84
HSPG2-210ENST00000481644 ANO9A1A5B4 782 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 PIRO00625 290 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 TBC1D4O60343 1298 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 HNRNPA1P09651 372 aaKnown RBP eCLIP20.27■□□□□ 0.84
HSPG2-210ENST00000481644 ARPP19P56211 112 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 LILRA4P59901 499 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 YWHAHQ04917 246 aaPredicted RBP20.27■□□□□ 0.84
HSPG2-210ENST00000481644 SLC7A14Q8TBB6 771 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 SCFD1Q8WVM8 642 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 WDR6Q9NNW5 1121 aaKnown RBP20.27■□□□□ 0.84
HSPG2-210ENST00000481644 EXOC1Q9NV70 894 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 FBXL5Q9UKA1 691 aa20.27■□□□□ 0.84
HSPG2-210ENST00000481644 SCN1AP35498 2009 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms