RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ZNF276Q8N554 614 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.79□□□□□ -1.64
COPA-204ENST00000481522 CCHCR1Q8TD31 782 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 HOXB13Q92826 284 aaPredicted RBP4.79□□□□□ -1.64
COPA-204ENST00000481522 DCLRE1CQ96SD1 692 aaKnown RBP4.79□□□□□ -1.64
COPA-204ENST00000481522 NRDE2Q9H7Z3 1164 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 TRPM5Q9NZQ8 1165 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 PTGFRNQ9P2B2 879 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 TUBD1Q9UJT1 453 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 STRCP1A6NGW2 1772 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 AFF2P51816 1311 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ARHGEF40Q8TER5 1519 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 E2F8A0AVK6 867 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 CXorf49A8MYA2 514 aaPredicted RBP4.78□□□□□ -1.64
COPA-204ENST00000481522 DIRC3C9JPN6 131 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 RHOBTB3O94955 611 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ALOX15P16050 662 aaPredicted RBP4.78□□□□□ -1.64
COPA-204ENST00000481522 ATP5JP18859 108 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 GUCY1A2P33402 732 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 EPHB1P54762 984 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ADKP55263 362 aaKnown RBP4.78□□□□□ -1.64
COPA-204ENST00000481522 SLC25A3Q00325 362 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 KIF23Q02241 960 aaPredicted RBP4.78□□□□□ -1.64
COPA-204ENST00000481522 NHLH2Q02577 135 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ODF1Q14990 250 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ATP2B3Q16720 1220 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 TMEM240Q5SV17 173 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ATXN7L2Q5T6C5 722 aaPredicted RBP4.78□□□□□ -1.64
COPA-204ENST00000481522 AFMIDQ63HM1 303 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 GPRIN1Q7Z2K8 1008 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 GDF7Q7Z4P5 450 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 DRC7Q8IY82 874 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 NRG4Q8WWG1 115 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 CASKIN2Q8WXE0 1202 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 HOOK2Q96ED9 719 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 CYFIP2Q96F07 1278 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 KCNH6Q9H252 994 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 LDAHQ9H6V9 325 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 GPRC5BQ9NZH0 403 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 INTUQ9ULD6 942 aa4.78□□□□□ -1.64
COPA-204ENST00000481522 ABCC2Q92887 1545 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 ROBO1Q9Y6N7 1651 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 GRXCR1A8MXD5 290 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 MASP2O00187 686 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 LMNAP02545 664 aaKnown RBP4.77□□□□□ -1.65
COPA-204ENST00000481522 CT47B1P0C2W7 299 aaPredicted RBP4.77□□□□□ -1.65
COPA-204ENST00000481522 PROZP22891 400 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 WASP42768 502 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 ALDH1A3P47895 512 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 C21orf58P58505 322 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 MCL1Q07820 350 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 PIN1Q13526 163 aaPredicted RBP4.77□□□□□ -1.65
COPA-204ENST00000481522 SEPT2Q15019 361 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 UAP1L1Q3KQV9 507 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 COLEC12Q5KU26 742 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 PRIMA1Q86XR5 153 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 PLXDC1Q8IUK5 500 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 RHOT1Q8IXI2 618 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 MIER2Q8N344 545 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 CPA6Q8N4T0 437 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 GPR150Q8NGU9 434 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 SLC35B2Q8TB61 432 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 HAS1Q92839 578 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 HDAC10Q969S8 669 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 PHACTR3Q96KR7 559 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 PUS7Q96PZ0 661 aaKnown RBP4.77□□□□□ -1.65
COPA-204ENST00000481522 MRI1Q9BV20 369 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 SLC46A2Q9BY10 475 aa4.77□□□□□ -1.65
COPA-204ENST00000481522 REXO4Q9GZR2 422 aaKnown RBP4.77□□□□□ -1.65
COPA-204ENST00000481522 LEFTY2O00292 366 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 IL33O95760 270 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 SLC6A9P48067 706 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 RNASE9P60153 205 aaKnown RBP4.76□□□□□ -1.65
COPA-204ENST00000481522 MXRA7P84157 204 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 CREMQ03060 361 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 ZNF529Q6P280 563 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 LRRC55Q6ZSA7 311 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 RSPH3Q86UC2 560 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 CMTR2Q8IYT2 770 aaKnown RBP4.76□□□□□ -1.65
COPA-204ENST00000481522 OR2I1PQ8NGU4 316 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 STON2Q8WXE9 905 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 DPF2Q92785 391 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 COA7Q96BR5 231 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 RIOX1Q9H6W3 641 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 TCF7L1Q9HCS4 588 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 ADARB2Q9NS39 739 aaKnown RBP4.76□□□□□ -1.65
COPA-204ENST00000481522 TDP1Q9NUW8 608 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 IP6K2Q9UHH9 426 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 RUVBL1Q9Y265 456 aaKnown RBP4.76□□□□□ -1.65
COPA-204ENST00000481522 SIK3Q9Y2K2 1263 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 ARAP3Q8WWN8 1544 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 JCADQ9P266 1359 aa4.76□□□□□ -1.65
COPA-204ENST00000481522 RAD54L2Q9Y4B4 1467 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 MYBBP1AQ9BQG0 1328 aaKnown RBP4.75□□□□□ -1.65
COPA-204ENST00000481522 PHLPP1O60346 1717 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 FRMPD1Q5SYB0 1578 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 RNASET2O00584 256 aaKnown RBP4.75□□□□□ -1.65
COPA-204ENST00000481522 AKAP10O43572 662 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 ABLIM3O94929 683 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 ZRANB2O95218 330 aaKnown RBP eCLIP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms