RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 WDR44Q5JSH3 913 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 HEATR6Q6AI08 1181 aaKnown RBP22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 IQCEQ6IPM2 695 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 CEP68Q76N32 757 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 HS6ST3Q8IZP7 471 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 TNFRSF25Q93038 417 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 E2F7Q96AV8 911 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 CYP46A1Q9Y6A2 500 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 SMIM28A0A1B0GU29 152 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 HEPACAM2A8MVW5 462 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 H7C4K7 107 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 LIG1P18858 919 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 NR5A1Q13285 461 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 MRPL58Q14197 206 aaKnown RBP22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 WDR5BQ86VZ2 330 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 DEPTORQ8TB45 409 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 CSGALNACT1Q8TDX6 532 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 C8orf33Q9H7E9 229 aaPredicted RBP22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 ASAH2Q9NR71 780 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 CEP72Q9P209 647 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 FBXL5Q9UKA1 691 aa22.25■■□□□ 1.15
PDLIM1-202ENST00000477757 ZFYVE26Q68DK2 2539 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 LAMA1P25391 3075 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 SLC38A8A6NNN8 435 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 PODXLO00592 558 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 NEMFO60524 1076 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 SPATA31C1P0DKV0 1188 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 MYL4P12829 197 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 SF3A2Q15428 464 aaKnown RBP22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 DGKKQ5KSL6 1271 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 C12orf50Q8NA57 414 aaPredicted RBP22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 RSPRY1Q96DX4 576 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 ZNF512Q96ME7 567 aaPredicted RBP22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 C2orf42Q9NWW7 574 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 MAFFQ9ULX9 164 aa22.24■■□□□ 1.15
PDLIM1-202ENST00000477757 TRIP11Q15643 1979 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 CHADO15335 359 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 REC8O95072 547 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 GJA1P17302 382 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 TXKP42681 527 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 SOX9P48436 509 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 KPNA1P52294 538 aaPredicted RBP22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 EFNA5P52803 228 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 FCHO2Q0JRZ9 810 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 TWF1Q12792 350 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 PPP2R5AQ15172 486 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 XKR4Q5GH76 650 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 ATF7IP2Q5U623 682 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 APBB1IPQ7Z5R6 666 aaPredicted RBP22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 YAF2Q8IY57 180 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 SHKBP1Q8TBC3 707 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 LOXL4Q96JB6 756 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 MTMR9Q96QG7 549 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 KIFC3Q9BVG8 833 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 GPR88Q9GZN0 384 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 TUFT1Q9NNX1 390 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 TOPORSQ9NS56 1045 aaPredicted RBP22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 SLC38A7Q9NVC3 462 aa22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 AFF4Q9UHB7 1163 aaKnown RBP22.23■■□□□ 1.15
PDLIM1-202ENST00000477757 MYBPHLA2RUH7 354 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 ZNF806P0C7X5 589 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 CTHP32929 405 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 KRT2P35908 639 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 SCRN1Q12765 414 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 TEAD2Q15562 447 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 CTXN3Q4LDR2 81 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 NT5DC1Q5TFE4 455 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 ZNF280DQ6N043 979 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 TXNDC11Q6PKC3 985 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 SLITRK6Q9H5Y7 841 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 ASPMQ8IZT6 3477 aa22.22■■□□□ 1.15
PDLIM1-202ENST00000477757 SPECC1L-ADORA2AF8WAN1 911 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 EPN2O95208 641 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 PROS1P07225 676 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 CYP11B2P19099 503 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 GRM5P41594 1212 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 YARSP54577 528 aaKnown RBP22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 PADI6Q6TGC4 694 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 ALKAL1Q6UXT8 129 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 RALGPS2Q86X27 583 aaPredicted RBP22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 CATSPER3Q86XQ3 398 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 CEP120Q8N960 986 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 NACC1Q96RE7 527 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 TM6SF1Q9BZW5 370 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 ARRDC1-AS1Q9H2J1 176 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 RXFP3Q9NSD7 469 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 IGF2RP11717 2491 aa22.21■■□□□ 1.15
PDLIM1-202ENST00000477757 WNT7AO00755 349 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 MED24O75448 989 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 CCINQ13939 588 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 STPG1Q5TH74 334 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 SYNPOQ8N3V7 929 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 GAB3Q8WWW8 586 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 SUSD3Q96L08 255 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 CCDC94Q9BW85 323 aaPredicted RBP22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 CDT1Q9H211 546 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 BRMS1Q9HCU9 246 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 TNFSF13BQ9Y275 285 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 YIPF1Q9Y548 306 aa22.2■■□□□ 1.14
PDLIM1-202ENST00000477757 NUB1Q9Y5A7 615 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms