RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 DCAF4L1Q3SXM0 396 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 CFAP221Q4G0U5 840 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 MEI1Q5TIA1 1274 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 ATF7IP2Q5U623 682 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 C11orf63Q6NUN7 778 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 WDR93Q6P2C0 686 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 MTHFD1LQ6UB35 978 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 FAM43BQ6ZT52 329 aaPredicted RBP7.16□□□□□ -1.26
LDB3-206ENST00000477489 RHPN2Q8IUC4 686 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PPM1KQ8N3J5 372 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 OR6J1Q8NGC5 347 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 TAS1R2Q8TE23 839 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 EPS8L1Q8TE68 723 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 AFG1LQ8WV93 481 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 VCPIP1Q96JH7 1222 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PBKQ96KB5 322 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PKNOX2Q96KN3 472 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 ZIC5Q96T25 663 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PDCL3Q9H2J4 239 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 R3HDMLQ9H3Y0 253 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PLEKHA5Q9HAU0 1116 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 UVRAGQ9P2Y5 699 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 TRIM10Q9UDY6 481 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 NOCTQ9UK39 431 aaKnown RBP7.16□□□□□ -1.26
LDB3-206ENST00000477489 RAB21Q9UL25 225 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
LDB3-206ENST00000477489 PCDHB2Q9Y5E7 798 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 CAPN6Q9Y6Q1 641 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 A0A0U1RQJ8 604 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 MBLAC1A4D2B0 266 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 MIF4GDA9UHW6 222 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 HAS3O00219 553 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 IGF2BP3O00425 579 aaKnown RBP eCLIP7.15□□□□□ -1.26
LDB3-206ENST00000477489 SORBS3O60504 671 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ASS1P00966 412 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 HLA-DRAP01903 254 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 TNNC2P02585 160 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 CLTAP09496 248 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ZNF865P0CJ78 1059 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 DLATP10515 647 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 CYP11B1P15538 503 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 MARK3P27448 753 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ATICP31939 592 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 PIK3CAP42336 1068 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 MATR3P43243 847 aaKnown RBP eCLIP7.15□□□□□ -1.26
LDB3-206ENST00000477489 NAP1L1P55209 391 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 FCGRTP55899 365 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 NLRP11P59045 1033 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 GPC5P78333 572 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 APBA1Q02410 837 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 CUL2Q13617 745 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 RPS6KA1Q15418 735 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ELF2Q15723 593 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 GRIK4Q16099 956 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ARHGAP44Q17R89 818 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 SGSM1Q2NKQ1 1148 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ERCC6LQ2NKX8 1250 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ZNF568Q3ZCX4 644 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 CCDC181Q5TID7 509 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 PTCRAQ6ISU1 281 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 GJB7Q6PEY0 223 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 TRMT1LQ7Z2T5 733 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 GLYCTKQ8IVS8 523 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ARHGEF19Q8IW93 802 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 NME8Q8N427 588 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 MMGT1Q8N4V1 131 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 LRRC57Q8N9N7 239 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 TPCN2Q8NHX9 752 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 OLIG1Q8TAK6 271 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 NPLOC4Q8TAT6 608 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 LNX1Q8TBB1 728 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 U2AF1L4Q8WU68 220 aaKnown RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 ATRIPQ8WXE1 791 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.15□□□□□ -1.26
LDB3-206ENST00000477489 COPS5Q92905 334 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ANKRD36BP1Q96IX9 119 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 KREMEN1Q96MU8 473 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 RPS6KC1Q96S38 1066 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 OSBPL9Q96SU4 736 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 NAP1L3Q99457 506 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 ADPGKQ9BRR6 497 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 TCHPQ9BT92 498 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 SELENOOQ9BVL4 669 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 CFHR5Q9BXR6 569 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 GCOM2Q9BZD3 368 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 ZNF518BQ9C0D4 1074 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 AP5M1Q9H0R1 490 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 RNPEPQ9H4A4 650 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 VRTNQ9H8Y1 702 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 IFT122Q9HBG6 1241 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 AVENQ9NQS1 362 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 ANKFY1Q9P2R3 1169 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 AJAP1Q9UKB5 411 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 GTF3C4Q9UKN8 822 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 ZHX1Q9UKY1 873 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 TTC7AQ9ULT0 858 aaPredicted RBP7.15□□□□□ -1.26
LDB3-206ENST00000477489 DERAQ9Y315 318 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 C2CD2Q9Y426 696 aa7.15□□□□□ -1.26
LDB3-206ENST00000477489 A0A1B0GUA9 196 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms