RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ASPAP45381 313 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 CDK7P50613 346 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 XKR4Q5GH76 650 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 ZNF569Q5MCW4 686 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 CD302Q8IX05 232 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.07
COL4A6-206ENST00000477085 U2AF1L4Q8WU68 220 aaKnown RBP15.52■□□□□ 0.07
COL4A6-206ENST00000477085 C18orf25Q96B23 403 aaPredicted RBP15.52■□□□□ 0.07
COL4A6-206ENST00000477085 TRIM6Q9C030 488 aaPredicted RBP15.52■□□□□ 0.07
COL4A6-206ENST00000477085 DPP3Q9NY33 737 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 CNTN3Q9P232 1028 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 PADI3Q9ULW8 664 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 R3HCC1Q9Y3T6 440 aaKnown RBP15.52■□□□□ 0.07
COL4A6-206ENST00000477085 A0A0U1RQG5 324 aaPredicted RBP15.51■□□□□ 0.07
COL4A6-206ENST00000477085 ARVCFO00192 962 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 DNM1LO00429 736 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 KIF5CO60282 957 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 TUBB4AP04350 444 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 RPLP2P05387 115 aaKnown RBP15.51■□□□□ 0.07
COL4A6-206ENST00000477085 MMEP08473 750 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 CCDC172P0C7W6 258 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 GHRP10912 638 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 CKBP12277 381 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 KRT5P13647 590 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 FMO1Q01740 532 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 KIF5AQ12840 1032 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 MBTPS1Q14703 1052 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 ZNF699Q32M78 642 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 GLRA4Q5JXX5 417 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 TAF3Q5VWG9 929 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 TWF2Q6IBS0 349 aaKnown RBP15.51■□□□□ 0.07
COL4A6-206ENST00000477085 APBB1IPQ7Z5R6 666 aaPredicted RBP15.51■□□□□ 0.07
COL4A6-206ENST00000477085 FMNL3Q8IVF7 1028 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 SLC35F6Q8N357 371 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 KIF18AQ8NI77 898 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 FAM81BQ96LP2 452 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 TUBGCP4Q9UGJ1 667 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 OGDHLQ9ULD0 1010 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 NOD1Q9Y239 953 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 PCDHB2Q9Y5E7 798 aa15.51■□□□□ 0.07
COL4A6-206ENST00000477085 MACROD2A1Z1Q3 448 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 KBTBD13C9JR72 458 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 PPEF2O14830 753 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 KRT86O43790 486 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 WEE2P0C1S8 567 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 TNFAIP3P21580 790 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 TBXAS1P24557 533 aaPredicted RBP15.5■□□□□ 0.07
COL4A6-206ENST00000477085 POLR2BP30876 1174 aaKnown RBP15.5■□□□□ 0.07
COL4A6-206ENST00000477085 NIF3L1Q9GZT8 377 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 RNF208Q9H0X6 261 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 SDCBP2Q9H190 292 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 AGAP1Q9UPQ3 857 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 DERAQ9Y315 318 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
COL4A6-206ENST00000477085 SMIM28A0A1B0GU29 152 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 GPR182O15218 404 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 MNX1P50219 401 aaPredicted RBP15.49■□□□□ 0.07
COL4A6-206ENST00000477085 AFF1P51825 1210 aaKnown RBP15.49■□□□□ 0.07
COL4A6-206ENST00000477085 ZNF132P52740 706 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 YARSP54577 528 aaKnown RBP15.49■□□□□ 0.07
COL4A6-206ENST00000477085 DSC3Q14574 896 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 TMEM270Q6UE05 265 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 NT5DC4Q86YG4 428 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 IMPG2Q9BZV3 1241 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 CHST12Q9NRB3 414 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 NXF1Q9UBU9 619 aaKnown RBP15.49■□□□□ 0.07
COL4A6-206ENST00000477085 PARP2Q9UGN5 583 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 MOCS3O95396 460 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 CFHP08603 1231 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 RAP1GAPP47736 663 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 CDH8P55286 799 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 CDR2Q01850 454 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 WDR72Q3MJ13 1102 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 C10orf76Q5T2E6 689 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 SCARA5Q6ZMJ2 495 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 VPS36Q86VN1 386 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 GSTCDQ8NEC7 633 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 TAF4BQ92750 862 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 BCO2Q9BYV7 579 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 TSGA10Q9BZW7 698 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 VRTNQ9H8Y1 702 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 CISHQ9NSE2 258 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 ITGA11Q9UKX5 1188 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 CAPN6Q9Y6Q1 641 aa15.49■□□□□ 0.07
COL4A6-206ENST00000477085 PTGESO14684 152 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 KCNE1P15382 129 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 CD58P19256 250 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 CASQ1P31415 396 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 GALCP54803 685 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 RBP5P82980 135 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
COL4A6-206ENST00000477085 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 RBBP8NLQ8NC74 664 aaPredicted RBP15.48■□□□□ 0.07
COL4A6-206ENST00000477085 LPPQ93052 612 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 HPDLQ96IR7 371 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 ZFP42Q96MM3 310 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 ZSWIM1Q9BR11 485 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 SMYD3Q9H7B4 428 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms