RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GOLGA6L9A6NEM1 432 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 CYP26A1O43174 497 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 FAM228BP0C875 321 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 CLCN1P35523 988 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 SLC18A3Q16572 532 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 NYAP1Q6ZVC0 841 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 DIS3LQ8TF46 1054 aaKnown RBP30.97■■■□□ 2.55
VEGFA-211ENST00000476772 TAF4BQ92750 862 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 C18orf25Q96B23 403 aaPredicted RBP30.97■■■□□ 2.55
VEGFA-211ENST00000476772 AGAP1Q9UPQ3 857 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 SMIM28A0A1B0GU29 152 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 MEIS3P2A8K0S8 358 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 KRT5P13647 590 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 HACE1Q8IYU2 909 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 OLIG1Q8TAK6 271 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 JAKMIP2Q96AA8 810 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 ADAM2Q99965 735 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 SYT11Q9BT88 431 aa30.96■■■□□ 2.55
VEGFA-211ENST00000476772 TLR3O15455 904 aaKnown RBP30.95■■■□□ 2.55
VEGFA-211ENST00000476772 ITGA4P13612 1032 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 KCNE1P15382 129 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 ACO1P21399 889 aaKnown RBP30.95■■■□□ 2.55
VEGFA-211ENST00000476772 GJA8P48165 433 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 BEST2Q8NFU1 509 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 TRAIPQ9BWF2 469 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 LZTFL1Q9NQ48 299 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 UBQLN1Q9UMX0 589 aaKnown RBP30.95■■■□□ 2.55
VEGFA-211ENST00000476772 TFR2Q9UP52 801 aa30.95■■■□□ 2.55
VEGFA-211ENST00000476772 ANXA13P27216 316 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 ATICP31939 592 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 RAB27AP51159 221 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 RBP5P82980 135 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 KIAA1328Q86T90 577 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 LPPQ93052 612 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 IFIH1Q9BYX4 1025 aaKnown RBP30.94■■■□□ 2.54
VEGFA-211ENST00000476772 ACP6Q9NPH0 428 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 PCDHA13Q9Y5I0 950 aa30.94■■■□□ 2.54
VEGFA-211ENST00000476772 COL6A1P12109 1028 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 PTPN14Q15678 1187 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 ZNF667Q5HYK9 610 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 SCARA5Q6ZMJ2 495 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 ANKRD33Q7Z3H0 272 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 MRPL10Q7Z7H8 261 aaKnown RBP30.93■■■□□ 2.54
VEGFA-211ENST00000476772 SLC47A2Q86VL8 602 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 VPS36Q86VN1 386 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 LNX1Q8TBB1 728 aaPredicted RBP30.93■■■□□ 2.54
VEGFA-211ENST00000476772 SLC20A1Q8WUM9 679 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 TSPAN18Q96SJ8 248 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 NXF1Q9UBU9 619 aaKnown RBP30.93■■■□□ 2.54
VEGFA-211ENST00000476772 POLIQ9UNA4 740 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 R3HCC1Q9Y3T6 440 aaKnown RBP30.93■■■□□ 2.54
VEGFA-211ENST00000476772 ARHGAP25P42331 645 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 ASPAP45381 313 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 BMS1Q14692 1282 aaKnown RBP30.93■■■□□ 2.54
VEGFA-211ENST00000476772 UBR7Q8N806 425 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 EPS8L1Q8TE68 723 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 HPDLQ96IR7 371 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 ZFP42Q96MM3 310 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 VRTNQ9H8Y1 702 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 PCDHB4Q9Y5E5 795 aa30.93■■■□□ 2.54
VEGFA-211ENST00000476772 RCCD1A6NED2 376 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 PITPNM1O00562 1244 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 DDX3XO00571 662 aaKnown RBP eCLIP30.92■■■□□ 2.545e-12■■■■□ 21
VEGFA-211ENST00000476772 PTGESO14684 152 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 ZNF623O75123 536 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 ABL1P00519 1130 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 VAV2P52735 878 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 WDR72Q3MJ13 1102 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 TRIM60Q495X7 471 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 NOP9Q86U38 636 aaKnown RBP30.92■■■□□ 2.54
VEGFA-211ENST00000476772 AGPAT1Q99943 283 aa30.92■■■□□ 2.54
VEGFA-211ENST00000476772 A0A0U1RQF3 1178 aa30.91■■■□□ 2.54
VEGFA-211ENST00000476772 MLH1P40692 756 aa30.91■■■□□ 2.54
VEGFA-211ENST00000476772 MAGEA1P43355 309 aa30.91■■■□□ 2.54
VEGFA-211ENST00000476772 ARHGAP29Q52LW3 1261 aa30.91■■■□□ 2.54
VEGFA-211ENST00000476772 AGMOQ6ZNB7 445 aa30.91■■■□□ 2.54
VEGFA-211ENST00000476772 GLYCTKQ8IVS8 523 aa30.91■■■□□ 2.54
VEGFA-211ENST00000476772 NOCTQ9UK39 431 aaKnown RBP30.91■■■□□ 2.54
VEGFA-211ENST00000476772 PPEF2O14830 753 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 CYP11B1P15538 503 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 ATF7P17544 494 aaPredicted RBP30.9■■■□□ 2.54
VEGFA-211ENST00000476772 IBSPP21815 317 aaPredicted RBP30.9■■■□□ 2.54
VEGFA-211ENST00000476772 ANKLE1Q8NAG6 615 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 SLC30A5Q8TAD4 765 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 GAD1Q99259 594 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 TRIM10Q9UDY6 481 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 NENFQ9UMX5 172 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 CNTN6Q9UQ52 1028 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 GIT1Q9Y2X7 761 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 XPOTO43592 962 aaKnown RBP30.9■■■□□ 2.54
VEGFA-211ENST00000476772 NBNO60934 754 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 STAU1O95793 577 aaKnown RBP30.9■■■□□ 2.54
VEGFA-211ENST00000476772 TNNT1P13805 278 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 PDE6CP51160 858 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 TMEM270Q6UE05 265 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 RNF169Q8NCN4 708 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 LACRTQ9GZZ8 138 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 NAGPAQ9UK23 515 aa30.9■■■□□ 2.54
VEGFA-211ENST00000476772 DCDC2CA8MYV0 355 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 CALCAP01258 141 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms