RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 SPTLC3Q9NUV7 552 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 TRMT1Q9NXH9 659 aaKnown RBP13.15□□□□□ -0.3
MRPL55-227ENST00000475832 ITGA11Q9UKX5 1188 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 EVPLQ92817 2033 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 PTPRJQ12913 1337 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 MUC3AQ02505 3323 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 DCDC2CA8MYV0 355 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 GHRP10912 638 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 CKBP12277 381 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ITGA4P13612 1032 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 SELPP16109 830 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 KIF11P52732 1056 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 WNT7BP56706 349 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 PTPN14Q15678 1187 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF699Q32M78 642 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 C10orf76Q5T2E6 689 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 E4F1Q66K89 784 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-227ENST00000475832 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 TMEM192Q8IY95 271 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
MRPL55-227ENST00000475832 WNT8BQ93098 351 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 SNX27Q96L92 541 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-227ENST00000475832 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 UBN1Q9NPG3 1134 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 PADI3Q9ULW8 664 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 UBQLN1Q9UMX0 589 aaKnown RBP13.14□□□□□ -0.31
MRPL55-227ENST00000475832 IPPQ9Y573 584 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 EYSQ5T1H1 3165 aa13.14□□□□□ -0.31
MRPL55-227ENST00000475832 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 LRRN2O75325 713 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 RECQL4O94761 1208 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
MRPL55-227ENST00000475832 VNN1O95497 513 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 ASS1P00966 412 aaKnown RBP13.13□□□□□ -0.31
MRPL55-227ENST00000475832 NFICP08651 508 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 KRT5P13647 590 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 ITGB8P26012 769 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 CD52P31358 61 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
MRPL55-227ENST00000475832 CUL2Q13617 745 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 LPIN1Q14693 890 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 MTF1Q14872 753 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 LRRC8DQ7L1W4 858 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 IRF2BP2Q7Z5L9 587 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 TTC39CQ8N584 583 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 HELQQ8TDG4 1101 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 PPP1R13BQ96KQ4 1090 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 RPS6KC1Q96S38 1066 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 DESI2Q9BSY9 194 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 NIF3L1Q9GZT8 377 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
MRPL55-227ENST00000475832 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 FAM105AQ9NUU6 356 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 DPP3Q9NY33 737 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 CNTN3Q9P232 1028 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 PCDHB2Q9Y5E7 798 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
MRPL55-227ENST00000475832 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-227ENST00000475832 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 KRT86O43790 486 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 ITGB3P05106 788 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 TNFAIP3P21580 790 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 PDE6CP51160 858 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 MYL6P60660 151 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 KIF5AQ12840 1032 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 BMS1Q14692 1282 aaKnown RBP13.12□□□□□ -0.31
MRPL55-227ENST00000475832 SLC18A3Q16572 532 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-227ENST00000475832 SHC3Q92529 594 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 TATDN2Q93075 761 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 FAM124BQ9H5Z6 455 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-227ENST00000475832 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-227ENST00000475832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.316e-6■■■■■ 48.1
MRPL55-227ENST00000475832 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-227ENST00000475832 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 GIT1Q9Y2X7 761 aa13.12□□□□□ -0.31
MRPL55-227ENST00000475832 KIF5CO60282 957 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 422.4 ms