RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MAIP1Q8WWC4 291 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 SOCS4Q8WXH5 440 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.23■■□□□ 1.312e-6■■■■■ 102.1
CCM2-206ENST00000474617 SMARCAL1Q9NZC9 954 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCM2-206ENST00000474617 PCDHA3Q9Y5H8 950 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 TRPM7Q96QT4 1865 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 SPOPO43791 374 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 FGGP02679 453 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 COMTP21964 271 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 TFAMQ00059 246 aaKnown RBP23.23■■□□□ 1.31
CCM2-206ENST00000474617 TAP1Q03518 808 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 DHX34Q14147 1143 aaKnown RBP23.23■■□□□ 1.31
CCM2-206ENST00000474617 MESDQ14696 234 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 TMEM63BQ5T3F8 832 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 MON1BQ7L1V2 547 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 GOLGA6L1Q8N7Z2 621 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 FAM71BQ8TC56 605 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 C2CD2Q9Y426 696 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 CEP83Q9Y592 693 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 A0A087WZ62 844 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 SART1O43290 800 aaKnown RBP23.22■■□□□ 1.31
CCM2-206ENST00000474617 ERLIN2O94905 339 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 STAU1O95793 577 aaKnown RBP23.22■■□□□ 1.31
CCM2-206ENST00000474617 CALB1P05937 261 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 ZNF286BP0CG31 522 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 RWDD2BP57060 319 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 NOMO3P69849 1222 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 PTP4A2Q12974 167 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 ALS2CLQ60I27 953 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 SPOPLQ6IQ16 392 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 THNSL1Q8IYQ7 743 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 MREGQ8N565 214 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 NLRP7Q8WX94 980 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 TSPAN18Q96SJ8 248 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 FDXACB1Q9BRP7 624 aaPredicted RBP23.22■■□□□ 1.31
CCM2-206ENST00000474617 RAB17Q9H0T7 212 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 PDZD7Q9H5P4 517 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 CYP3A43Q9HB55 503 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 MTUS1Q9ULD2 1270 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 PCDHGC3Q9UN70 934 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 DERAQ9Y315 318 aa23.22■■□□□ 1.31
CCM2-206ENST00000474617 FAM187AA6NFU0 413 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 BHMG1C9JSJ3 638 aaPredicted RBP23.21■■□□□ 1.31
CCM2-206ENST00000474617 MYO1FO00160 1098 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 THAP12O43422 761 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 MED7O43513 233 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 F2P00734 622 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 STAG3L1P0CL83 205 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 MAN1A1P33908 653 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 CPT1AP50416 773 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 PEX5P50542 639 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 MYL6P60660 151 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 CHADLQ6NUI6 762 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 RASAL3Q86YV0 1011 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 NPLOC4Q8TAT6 608 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 HDAC7Q8WUI4 952 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 MINDY3Q9H8M7 445 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 PLEKHA5Q9HAU0 1116 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 ACP6Q9NPH0 428 aa23.21■■□□□ 1.31
CCM2-206ENST00000474617 A0A1B0GUA9 196 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 SMIM35A0A1B0GVV1 85 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 B4GALT5O43286 388 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 RAD51CO43502 376 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 CST3P01034 146 aaPredicted RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 PAEPP09466 180 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 EIF4BP23588 611 aaKnown RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 CHRNA3P32297 505 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 RGS2P41220 211 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 GUCY2DQ02846 1103 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 GJC2Q5T442 439 aaPredicted RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 CST9Q5W186 159 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 EEF1DP3Q658K8 133 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 TMEM35BQ8NCS4 154 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 SEC14L1Q92503 715 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 FAM212AQ96EL1 285 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 KATNAL1Q9BW62 490 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 GCOM2Q9BZD3 368 aaPredicted RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 XYLT2Q9H1B5 865 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 EPB41L5Q9HCM4 733 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 FAM114A2Q9NRY5 505 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 CISHQ9NSE2 258 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 PARVAQ9NVD7 372 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 ADAM22Q9P0K1 906 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 ITGA11Q9UKX5 1188 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 HPCAL4Q9UM19 191 aa23.2■■□□□ 1.3
CCM2-206ENST00000474617 GNEQ9Y223 722 aaKnown RBP23.2■■□□□ 1.3
CCM2-206ENST00000474617 EVPLQ92817 2033 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 ITGBL1O95965 494 aaPredicted RBP23.19■■□□□ 1.3
CCM2-206ENST00000474617 GLI1P08151 1106 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 OAS2P29728 719 aaKnown RBP23.19■■□□□ 1.3
CCM2-206ENST00000474617 AXLP30530 894 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 CDH5P33151 784 aaPredicted RBP23.19■■□□□ 1.3
CCM2-206ENST00000474617 TAF1CQ15572 869 aaPredicted RBP23.19■■□□□ 1.3
CCM2-206ENST00000474617 SEZ6Q53EL9 994 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 ZNF667Q5HYK9 610 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 DCAF12L1Q5VU92 463 aa23.19■■□□□ 1.3
CCM2-206ENST00000474617 NAA35Q5VZE5 725 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms