RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ZNF131P52739 623 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 OSTNP61366 133 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 PRSS36Q5K4E3 855 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 MCTP1Q6DN14 999 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 IQCEQ6IPM2 695 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 ADSSL1Q8N142 457 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 ELMOD1Q8N336 334 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 DDX12PQ92771 950 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 E2F7Q96AV8 911 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 CDK5RAP3Q96JB5 506 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 TMX3Q96JJ7 454 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 TBC1D32Q96NH3 1257 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 TRPV4Q9HBA0 871 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 UBQLN1Q9UMX0 589 aaKnown RBP14.77□□□□□ -0.05
CHD3-209ENST00000473376 MYO15AQ9UKN7 3530 aa14.77□□□□□ -0.05
CHD3-209ENST00000473376 H3BQV1 296 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 MEFVO15553 781 aaPredicted RBP14.76□□□□□ -0.05
CHD3-209ENST00000473376 SP9P0CG40 484 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 MARCKSP29966 332 aaPredicted RBP14.76□□□□□ -0.05
CHD3-209ENST00000473376 MCM4P33991 863 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
CHD3-209ENST00000473376 CTXN3Q4LDR2 81 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 ZBTB41Q5SVQ8 909 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 CYP4A22Q5TCH4 519 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 C1orf228Q6PIY5 440 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 ZNF852Q6ZMS4 543 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 HAUS6Q7Z4H7 955 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 CYP4F11Q9HBI6 524 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 ZFP14Q9HCL3 533 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 HCFC1R1Q9NWW0 138 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
CHD3-209ENST00000473376 INSL5Q9Y5Q6 135 aa14.76□□□□□ -0.05
CHD3-209ENST00000473376 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 OR6C75A6NL08 312 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 SFI1A8K8P3 1242 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 I3L4J1 428 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 MAN2B1O00754 1011 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 DCNP07585 359 aaKnown RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 TYMPP19971 482 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 LONP1P36776 959 aaKnown RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 UBA7P41226 1012 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 YWHAHQ04917 246 aaPredicted RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 PLD1Q13393 1074 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 MYBPC2Q14324 1141 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 SLC5A9Q2M3M2 681 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 ARSHQ5FYA8 562 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 PDZD4Q76G19 769 aaPredicted RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 BRAPQ7Z569 592 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 DEPDC1BQ8WUY9 529 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 IRF7Q92985 503 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 C18orf25Q96B23 403 aaPredicted RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 CALML4Q96GE6 196 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 ZBTB45Q96K62 511 aaPredicted RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 ZNF512Q96ME7 567 aaPredicted RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 FAM126AQ9BYI3 521 aaPredicted RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 ST6GALNAC4Q9H4F1 302 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
CHD3-209ENST00000473376 LTB4R2Q9NPC1 389 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 ANKFY1Q9P2R3 1169 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 TBX20Q9UMR3 447 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 DERAQ9Y315 318 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 PCDHGA2Q9Y5H1 932 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 GVINP1Q7Z2Y8 2422 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 VPS13AQ96RL7 3174 aa14.75□□□□□ -0.05
CHD3-209ENST00000473376 A0A0B4J269 797 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 FAM170BA6NMN3 283 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 SPTLC1O15269 473 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 OGTO15294 1046 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 FAM189A1O60320 539 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 FGF19O95750 216 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 GJB2P29033 226 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 PPP2R3AQ06190 1150 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 GPR17Q13304 367 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 MAML2Q8IZL2 1156 aaPredicted RBP14.74□□□□□ -0.05
CHD3-209ENST00000473376 NELL1Q92832 810 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 SMARCD2Q92925 531 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 MSANTD3Q96H12 275 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 ASB16Q96NS5 453 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 KXD1Q9BQD3 176 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 ASB3Q9Y575 518 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 NOTCH4Q99466 2003 aa14.74□□□□□ -0.05
CHD3-209ENST00000473376 HNRNPDLO14979 420 aaKnown RBP14.73□□□□□ -0.05
CHD3-209ENST00000473376 LAMTOR5O43504 91 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 SEC24AO95486 1093 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 CXCL8P10145 99 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 FCARP24071 287 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 LIG4P49917 911 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 GTF2BQ00403 316 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 ADCY1Q08828 1119 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 SMARCB1Q12824 385 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 SPATA1Q5VX52 437 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 MAP4K3Q8IVH8 894 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 MCRS1Q96EZ8 462 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 BICD1Q96G01 975 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 CORO1BQ9BR76 489 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 TRMT61BQ9BVS5 477 aaKnown RBP14.73□□□□□ -0.05
CHD3-209ENST00000473376 FOXQ1Q9C009 403 aa14.73□□□□□ -0.05
CHD3-209ENST00000473376 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms