RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 KCNN1Q92952 543 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 SCAND2PQ9GZW5 306 aaPredicted RBP16.07■□□□□ 0.16
SSR4-208ENST00000471880 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 FRMD3A2A2Y4 597 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 LOC730098B7Z3J9 87 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 PI4K2BG5E9Z4 385 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 H7C4K7 107 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 FAM189A1O60320 539 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 CUL4BQ13620 913 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 CTXN3Q4LDR2 81 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 USP37Q86T82 979 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 GPR65Q8IYL9 337 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 C7orf25Q9BPX7 421 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 MTRRQ9UBK8 725 aa16.06■□□□□ 0.16
SSR4-208ENST00000471880 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
SSR4-208ENST00000471880 GOLGA6L4A6NEF3 574 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 C2CD4DB7Z1M9 353 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 LDHAP00338 332 aaKnown RBP16.05■□□□□ 0.16
SSR4-208ENST00000471880 C8AP07357 584 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 CPB1P15086 417 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 CYP3A5P20815 502 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 CMA1P23946 247 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 ADSSP30520 456 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 GBP2P32456 591 aaPredicted RBP16.05■□□□□ 0.16
SSR4-208ENST00000471880 ELF1P32519 619 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 SYKP43405 635 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 TFAMQ00059 246 aaKnown RBP16.05■□□□□ 0.16
SSR4-208ENST00000471880 TMEM31Q5JXX7 168 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 CD300LGQ6UXG3 332 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 C15orf39Q6ZRI6 1047 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 APPL2Q8NEU8 664 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 ACSF2Q96CM8 615 aaPredicted RBP16.05■□□□□ 0.16
SSR4-208ENST00000471880 SUSD3Q96L08 255 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 STRA6Q9BX79 667 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 SLC39A2Q9NP94 309 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 EXOC1Q9NV70 894 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 RBAKQ9NYW8 714 aaPredicted RBP16.05■□□□□ 0.16
SSR4-208ENST00000471880 NOTCH4Q99466 2003 aa16.05■□□□□ 0.16
SSR4-208ENST00000471880 PRRG1O14668 218 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 PPEF2O14830 753 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 SYN3O14994 580 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 CCL16O15467 120 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 IL18RAPO95256 599 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 SLFN14P0C7P3 912 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 GARTP22102 1010 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 LRPAP1P30533 357 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 NUCB2P80303 420 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 SPATA1Q5VX52 437 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 RSPO2Q6UXX9 243 aaPredicted RBP16.04■□□□□ 0.16
SSR4-208ENST00000471880 GET4Q7L5D6 327 aaPredicted RBP16.04■□□□□ 0.16
SSR4-208ENST00000471880 ZSWIM2Q8NEG5 633 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 ASB7Q9H672 318 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
SSR4-208ENST00000471880 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.04■□□□□ 0.16
SSR4-208ENST00000471880 STYXL1Q9Y6J8 313 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 ZDBF2Q9HCK1 2354 aa16.04■□□□□ 0.16
SSR4-208ENST00000471880 SCN1AP35498 2009 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 EXTL3O43909 919 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 ZMYND10O75800 440 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 CYP2J2P51589 502 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 NDUFA8P51970 172 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 YWHAHQ04917 246 aaPredicted RBP16.03■□□□□ 0.16
SSR4-208ENST00000471880 RAB33AQ14088 237 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 ZBTB6Q15916 424 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 LILRA6Q6PI73 481 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 OTOP3Q7RTS5 596 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 GPD1LQ8N335 351 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 PAGE5Q96GU1 130 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 TSPAN18Q96SJ8 248 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 LRFN3Q9BTN0 628 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 PRKD2Q9BZL6 878 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 CYP4F11Q9HBI6 524 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 ZDHHC7Q9NXF8 308 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 DERAQ9Y315 318 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 BACE2Q9Y5Z0 518 aa16.03■□□□□ 0.16
SSR4-208ENST00000471880 CLUHO75153 1309 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 MUC6Q6W4X9 2439 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 CLIC2O15247 247 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 EIF3DO15371 548 aaKnown RBP eCLIP16.02■□□□□ 0.16
SSR4-208ENST00000471880 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.16
SSR4-208ENST00000471880 XYLBO75191 536 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 CLSTN1O94985 981 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 KRT19P08727 400 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 TMEM191BP0C7N4 346 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 ODC1P11926 461 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 ROR1Q01973 937 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 C9orf57Q5W0N0 161 aa16.02■□□□□ 0.16
SSR4-208ENST00000471880 CRELD2Q6UXH1 353 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms