RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ABCB5Q2M3G0 1257 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 C3orf36Q3SXR2 165 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 FLYWCH1Q4VC44 716 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 PABPC1LQ4VXU2 614 aaKnown RBP4.23□□□□□ -1.73
COPS3-206ENST00000471414 PGM2L1Q6PCE3 622 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 MIGA2Q7L4E1 593 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 SLC44A3Q8N4M1 653 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 PPM1NQ8N819 430 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 PRPF38AQ8NAV1 312 aaKnown RBP4.23□□□□□ -1.73
COPS3-206ENST00000471414 CAVIN3Q969G5 261 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 HDAC10Q969S8 669 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 COA7Q96BR5 231 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 TEKT5Q96M29 485 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 SAP30BPQ9UHR5 308 aaKnown RBP4.23□□□□□ -1.73
COPS3-206ENST00000471414 SERPINB13Q9UIV8 391 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 PCDHB1Q9Y5F3 818 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 KLHL33A6NCF5 533 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 MGST3O14880 152 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 PROM1O43490 865 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 SLC43A1O75387 559 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 C1QL1O75973 258 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 MT-CO1P00395 513 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 FXR1P51114 621 aaKnown RBP eCLIP4.22□□□□□ -1.73
COPS3-206ENST00000471414 GUCY2FP51841 1108 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 RAB39AQ14964 217 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 GEN1Q17RS7 908 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 NSUN6Q8TEA1 469 aaKnown RBP4.22□□□□□ -1.73
COPS3-206ENST00000471414 TMX3Q96JJ7 454 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 TLR10Q9BXR5 811 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 CCDC8Q9H0W5 538 aaPredicted RBP4.22□□□□□ -1.73
COPS3-206ENST00000471414 TDP1Q9NUW8 608 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 TBCCD1Q9NVR7 557 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 MKS1Q9NXB0 559 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 KCTD5Q9NXV2 234 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 JKAMPQ9P055 326 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 CALCOCO1Q9P1Z2 691 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 CTTNBP2NLQ9P2B4 639 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 INSL6Q9Y581 213 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 PCDHA13Q9Y5I0 950 aa4.22□□□□□ -1.73
COPS3-206ENST00000471414 SHTN1A0MZ66 631 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 KIAA0391O15091 583 aaKnown RBP4.21□□□□□ -1.74
COPS3-206ENST00000471414 GRM6O15303 877 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 ZRANB2O95218 330 aaKnown RBP eCLIP4.21□□□□□ -1.74
COPS3-206ENST00000471414 SRGNP10124 158 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 MTHFD1P11586 935 aaKnown RBP4.21□□□□□ -1.74
COPS3-206ENST00000471414 CXCR5P32302 372 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 PLA2G5P39877 138 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 RARRES1P49788 294 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 SLC16A1P53985 500 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 ADKP55263 362 aaKnown RBP4.21□□□□□ -1.74
COPS3-206ENST00000471414 ZNF280AP59817 542 aaPredicted RBP4.21□□□□□ -1.74
COPS3-206ENST00000471414 DSC2Q02487 901 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 IL10RAQ13651 578 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 ODF1Q14990 250 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 PCBP2Q15366 365 aaKnown RBP eCLIP4.21□□□□□ -1.74
COPS3-206ENST00000471414 CLUL1Q15846 466 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 ATP2B3Q16720 1220 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 CCDC142Q17RM4 750 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 RNF187Q5TA31 235 aaPredicted RBP4.21□□□□□ -1.74
COPS3-206ENST00000471414 STRIP1Q5VSL9 837 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 FOXR2Q6PJQ5 311 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 ZNF365Q70YC5 407 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 TBC1D15Q8TC07 691 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 SSH3Q8TE77 659 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 RAB24Q969Q5 203 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 KLHL32Q96NJ5 620 aa4.21□□□□□ -1.74
COPS3-206ENST00000471414 CCDC154A6NI56 674 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 NT5C1B-RDH14C9J2C7 533 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 KATNA1O75449 491 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 MYBL2P10244 700 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 KCNA2P16389 499 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 NHLH1Q02575 133 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 CREMQ03060 361 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 FBXO42Q6P3S6 717 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 SYCE2Q6PIF2 218 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 RD3Q7Z3Z2 195 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 PTCD3Q96EY7 689 aaKnown RBP4.2□□□□□ -1.74
COPS3-206ENST00000471414 AIFM2Q9BRQ8 373 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 LRFN3Q9BTN0 628 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 ASPSCR1Q9BZE9 553 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 SEMA4GQ9NTN9 838 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 PTGFRNQ9P2B2 879 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 TESQ9UGI8 421 aaKnown RBP4.2□□□□□ -1.74
COPS3-206ENST00000471414 MTO1Q9Y2Z2 717 aaKnown RBP4.2□□□□□ -1.74
COPS3-206ENST00000471414 CFAP20Q9Y6A4 193 aaKnown RBP4.2□□□□□ -1.74
COPS3-206ENST00000471414 TNKSO95271 1327 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 WASHC2CQ9Y4E1 1318 aa4.2□□□□□ -1.74
COPS3-206ENST00000471414 PRAMEF33A0A0G2JMD5 474 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 ALG1L2C9J202 215 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 PRAMEF10O60809 474 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 SUN1O94901 812 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 AGFG2O95081 481 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 CD1AP06126 327 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 PTH2RP49190 550 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 CACNA2D1P54289 1103 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 C21orf58P58505 322 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 POU6F2P78424 691 aaPredicted RBP4.19□□□□□ -1.74
COPS3-206ENST00000471414 ACAP2Q15057 778 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 ERCC6LQ2NKX8 1250 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms