RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 MORC2Q9Y6X9 1032 aaPredicted RBP13.64□□□□□ -0.23
CCNL1-213ENST00000471044 CCDC195A0A1B0GUA6 201 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 KCNE1P15382 129 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 RPL17P18621 184 aaKnown RBP13.63□□□□□ -0.23
CCNL1-213ENST00000471044 MARCKSP29966 332 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-213ENST00000471044 DDIT3P35638 169 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PRR20EP86478 221 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PRR20CP86479 221 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PRR20DP86480 221 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PRR20BP86481 221 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PRR20AP86496 221 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-213ENST00000471044 MCL1Q07820 350 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 SIGLEC14Q08ET2 396 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PSMD5Q16401 504 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 UPP1Q16831 310 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 CCDC149Q6ZUS6 474 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 CEP57Q86XR8 500 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 GLYCTKQ8IVS8 523 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 EPSTI1Q96J88 318 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 ZMAT2Q96NC0 199 aaKnown RBP13.63□□□□□ -0.23
CCNL1-213ENST00000471044 CLSTN3Q9BQT9 956 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 ZSCAN16Q9H4T2 348 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-213ENST00000471044 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 GOLGA2P5Q9HBQ8 144 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 ZDHHC7Q9NXF8 308 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 WDR87Q6ZQQ6 2873 aa13.63□□□□□ -0.23
CCNL1-213ENST00000471044 TMEM221A6NGB7 291 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 M0R296 226 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 CLDN3O15551 220 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
CCNL1-213ENST00000471044 TRAPPC3O43617 180 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 STX6O43752 255 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 TRAK2O60296 914 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 FAM13AO94988 1023 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 PIGRP01833 764 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 SPATA31D3P0C874 917 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 HARSP12081 509 aaKnown RBP13.62□□□□□ -0.23
CCNL1-213ENST00000471044 FGFR3P22607 806 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 IGFBP6P24592 240 aaPredicted RBP13.62□□□□□ -0.23
CCNL1-213ENST00000471044 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 SPATA31D4Q6ZUB0 917 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 USP49Q70CQ1 688 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 KREMEN2Q8NCW0 462 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 C3orf58Q8NDZ4 430 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 PBXIP1Q96AQ6 731 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
CCNL1-213ENST00000471044 CLIC6Q96NY7 704 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 PRDM9Q9NQV7 894 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 ANKFY1Q9P2R3 1169 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 FBXW11Q9UKB1 542 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 SORCS3Q9UPU3 1222 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 FCF1Q9Y324 198 aaKnown RBP13.62□□□□□ -0.23
CCNL1-213ENST00000471044 NOTCH4Q99466 2003 aa13.62□□□□□ -0.23
CCNL1-213ENST00000471044 TCHHQ07283 1943 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 K7ENM7 598 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 PODXLO00592 558 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 GDF9O60383 454 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 RFPL2O75678 378 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 ZMYND10O75800 440 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 MYBP10242 640 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 RPL9P32969 192 aaKnown RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 ABCD1P33897 745 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 BRCC3P46736 316 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 GTF2BQ00403 316 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 TCF15Q12870 199 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 SLC39A14Q15043 492 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 OTOP3Q7RTS5 596 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 SUGP1Q8IWZ8 645 aaKnown RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 ASIC4Q96FT7 647 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 BICD1Q96G01 975 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 USP28Q96RU2 1077 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
CCNL1-213ENST00000471044 FAM86C1Q9NVL1 165 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 LIMD1Q9UGP4 676 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 TBX20Q9UMR3 447 aa13.61□□□□□ -0.23
CCNL1-213ENST00000471044 VPS13AQ96RL7 3174 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 TBCAO75347 108 aaKnown RBP13.6□□□□□ -0.23
CCNL1-213ENST00000471044 CLTAP09496 248 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 TXLNAP40222 546 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 MATR3P43243 847 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCNL1-213ENST00000471044 LIG4P49917 911 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 MTMR3Q13615 1198 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 RAB33AQ14088 237 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 KYAT1Q16773 422 aa13.6□□□□□ -0.23
CCNL1-213ENST00000471044 MSS51Q4VC12 460 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms