RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	PAPD7	Q5XG87	772 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	TMEM270	Q6UE05	265 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	SCARA5	Q6ZMJ2	495 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	FAM228A	Q86W67	206 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	ZNF677	Q86XU0	584 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	LRRN4CL	Q8ND94	238 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	DDX1	Q92499	740 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	WNT8B	Q93098	351 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	KIF12	Q96FN5	646 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	XYLT2	Q9H1B5	865 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	NXF3	Q9H4D5	531 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	PLEKHA5	Q9HAU0	1116 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	CNTN6	Q9UQ52	1028 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	DERA	Q9Y315	318 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	JRKL	Q9Y4A0	524 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	PCDHGC5	Q9Y5F6	944 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	FAM170A	A1A519	330 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	GRID2IP	A4D2P6	1211 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	ANKRD62	A6NC57	917 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	DYNC1I1	O14576	645 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	RTN2	O75298	545 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	PALM	O75781	387 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	CABYR	O75952	493 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	RECQL4	O94761	1208 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	CALCA	P01258	141 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	GNA15	P30679	374 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	POLR2B	P30876	1174 aa	Known RBP	13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	ASPA	P45381	313 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	NOP2	P46087	812 aa	Known RBP	13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	ACLY	P53396	1101 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	YWHAE	P62258	255 aa	Known RBP	13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	PTGIS	Q16647	500 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	WHAMMP3	Q1A5X7	153 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	ZNF667	Q5HYK9	610 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	UBXN11	Q5T124	520 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	TMEM130	Q8N3G9	435 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	RFFL	Q8WZ73	363 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	APOL6	Q9BWW8	343 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	ISCU	Q9H1K1	167 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	DPP3	Q9NY33	737 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	ITGA11	Q9UKX5	1188 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	POLI	Q9UNA4	740 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	NOC2L	Q9Y3T9	749 aa	Known RBP	13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	PCDHB2	Q9Y5E7	798 aa		13.17	□□□□□ -0.3
HDLBP-231	ENST00000467435	GRIN2D	O15399	1336 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	MOXD2P	A6NHM9	499 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	FTL	P02792	175 aa	Predicted RBP	13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	GZMA	P12544	262 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	CD58	P19256	250 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	ATIC	P31939	592 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	GRK4	P32298	578 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	GUCY2F	P51841	1108 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	ZNF132	P52740	706 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	PTPN11	Q06124	597 aa	Predicted RBP	13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	MGAT3	Q09327	533 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	ITGA7	Q13683	1181 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	CLEC16A	Q2KHT3	1053 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	TWF2	Q6IBS0	349 aa	Known RBP	13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	RPAIN	Q86UA6	219 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	CEP112	Q8N8E3	955 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	CXorf38	Q8TB03	319 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	ARHGEF26	Q96DR7	871 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	THAP2	Q9H0W7	228 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	HMX1	Q9NP08	348 aa	Predicted RBP	13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	CNTN3	Q9P232	1028 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	NXF1	Q9UBU9	619 aa	Known RBP	13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	TSKS	Q9UJT2	592 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	HYOU1	Q9Y4L1	999 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	HES2	Q9Y543	173 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	SAR1B	Q9Y6B6	198 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	PTCH2	Q9Y6C5	1203 aa		13.16	□□□□□ -0.3
HDLBP-231	ENST00000467435	THAP12	O43422	761 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	NCK2	O43639	380 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	TADA3	O75528	432 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	RPS6KA5	O75582	802 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	FTCD	O95954	541 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	THPO	P40225	353 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	RAP1GAP	P47736	663 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	RBP5	P82980	135 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	SMYD5	Q6GMV2	418 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	TRIM72	Q6ZMU5	477 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	TPCN2	Q8NHX9	752 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	TSC1	Q92574	1164 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	ZNF653	Q96CK0	615 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	FAXDC2	Q96IV6	333 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	GLT1D1	Q96MS3	346 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	BCO2	Q9BYV7	579 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	CXCL16	Q9H2A7	254 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	PDCL3	Q9H2J4	239 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	VRTN	Q9H8Y1	702 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	CISH	Q9NSE2	258 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	SNX12	Q9UMY4	172 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	AGAP1	Q9UPQ3	857 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	NOD1	Q9Y239	953 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	IPP	Q9Y573	584 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435	TRIM17	Q9Y577	477 aa		13.15	□□□□□ -0.3
HDLBP-231	ENST00000467435		V9GYY5	206 aa	Predicted RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms