RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 USP18Q9UMW8 372 aa13.4□□□□□ -0.26
UBR4-211ENST00000467272 NDRG2Q9UN36 371 aaKnown RBP13.4□□□□□ -0.26
UBR4-211ENST00000467272 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
UBR4-211ENST00000467272 ATRXP46100 2492 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 WDFY3Q8IZQ1 3526 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 PODXLO00592 558 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 VIPR2P41587 438 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
UBR4-211ENST00000467272 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 DAW1Q8N136 415 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
UBR4-211ENST00000467272 DEPDC1BQ8WUY9 529 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 SUSD3Q96L08 255 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 CCDC43Q96MW1 224 aaKnown RBP13.39□□□□□ -0.27
UBR4-211ENST00000467272 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
UBR4-211ENST00000467272 CDT1Q9H211 546 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 SEMA4GQ9NTN9 838 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 C2orf42Q9NWW7 574 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
UBR4-211ENST00000467272 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
UBR4-211ENST00000467272 LARGE1O95461 756 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 LRG1P02750 347 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 GDI1P31150 447 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 RPL9P32969 192 aaKnown RBP13.38□□□□□ -0.27
UBR4-211ENST00000467272 CNR2P34972 360 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 CXCL12P48061 93 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 ME3Q16798 604 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 PPM1JQ5JR12 505 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
UBR4-211ENST00000467272 TMC8Q8IU68 726 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 LEMD2Q8NC56 503 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 DEPTORQ8TB45 409 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 SHKBP1Q8TBC3 707 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 MSANTD3Q96H12 275 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 CYP4F11Q9HBI6 524 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 SLC38A7Q9NVC3 462 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 ARHGAP28Q9P2N2 729 aa13.38□□□□□ -0.27
UBR4-211ENST00000467272 ANKRD11Q6UB99 2663 aaPredicted RBP13.38□□□□□ -0.27
UBR4-211ENST00000467272 CACNA1GO43497 2377 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 FAM208BQ5VWN6 2430 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 PRRG1O14668 218 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 GDF9O60383 454 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 OAZ2O95190 189 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 HOXC13P31276 330 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 AARSP49588 968 aaKnown RBP eCLIP13.37□□□□□ -0.275e-9■■■■□ 21
UBR4-211ENST00000467272 LIMK1P53667 647 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 ST3GAL1Q11201 340 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 LPAL2Q16609 132 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 ST3GAL2Q16842 350 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 TXNDC11Q6PKC3 985 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 ZSCAN18Q8TBC5 510 aaPredicted RBP13.37□□□□□ -0.27
UBR4-211ENST00000467272 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 C18orf25Q96B23 403 aaPredicted RBP13.37□□□□□ -0.27
UBR4-211ENST00000467272 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
UBR4-211ENST00000467272 IGF2RP11717 2491 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.36□□□□□ -0.27
UBR4-211ENST00000467272 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 H7C4K7 107 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 M0QZQ0 153 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 CHADO15335 359 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 MCF2P10911 925 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 CCNE1P24864 410 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 WEE1P30291 646 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 ELF1P32519 619 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 NPTX2P47972 431 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 SHC2P98077 582 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 MAPK7Q13164 816 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
UBR4-211ENST00000467272 ORC2Q13416 577 aaPredicted RBP13.36□□□□□ -0.27
UBR4-211ENST00000467272 CCINQ13939 588 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 C1orf228Q6PIY5 440 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 RNF19BQ6ZMZ0 732 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 Q6ZS52 159 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 LONP2Q86WA8 852 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 DDX12PQ92771 950 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 E2F7Q96AV8 911 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 GPR88Q9GZN0 384 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 TOPORSQ9NS56 1045 aaPredicted RBP13.36□□□□□ -0.27
UBR4-211ENST00000467272 BAHCC1Q9P281 2608 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 ITPR1Q14643 2758 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 PHLPP2Q6ZVD8 1323 aa13.36□□□□□ -0.27
UBR4-211ENST00000467272 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
UBR4-211ENST00000467272 HEPACAM2A8MVW5 462 aa13.35□□□□□ -0.27
UBR4-211ENST00000467272 CHURC1-FNTBB4DL54 471 aa13.35□□□□□ -0.27
UBR4-211ENST00000467272 K7ERI5 159 aa13.35□□□□□ -0.27
UBR4-211ENST00000467272 ZNF263O14978 683 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms