RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 RUFY2Q8WXA3 655 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 TCTN2Q96GX1 697 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 SCLYQ96I15 445 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 CTAGE1Q96RT6 745 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 PIGSQ96S52 555 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 RMDN3Q96TC7 470 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 CDX2Q99626 313 aaPredicted RBP4.38□□□□□ -1.71
MSL3-209ENST00000467141 MTG1Q9BT17 334 aaPredicted RBP4.38□□□□□ -1.71
MSL3-209ENST00000467141 SPON2Q9BUD6 331 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 AMNQ9BXJ7 453 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 HDAC8Q9BY41 377 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 FOXP3Q9BZS1 431 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 MAF1Q9H063 256 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 ALDH8A1Q9H2A2 487 aaPredicted RBP4.38□□□□□ -1.71
MSL3-209ENST00000467141 HIPK3Q9H422 1215 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 RIOX1Q9H6W3 641 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 ZNF552Q9H707 407 aaPredicted RBP4.38□□□□□ -1.71
MSL3-209ENST00000467141 LY9Q9HBG7 655 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 PXMP2Q9NR77 195 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 TRMT13Q9NUP7 481 aaKnown RBP4.38□□□□□ -1.71
MSL3-209ENST00000467141 A0A0C4DFX4 3053 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 FRMPD4Q14CM0 1322 aa4.38□□□□□ -1.71
MSL3-209ENST00000467141 BRWD1Q9NSI6 2320 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 ERICH2A1L162 156 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 GRXCR1A8MXD5 290 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 SH2B2O14492 632 aaPredicted RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 SLC27A2O14975 620 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 PRC1O43663 620 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 ZEB2O60315 1214 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 PLEKHA8P1O95397 391 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 GH1P01241 217 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 CYP2C9P11712 490 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 RXRAP19793 462 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 HOXA13P31271 388 aaPredicted RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 CCNFP41002 786 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 CCL23P55773 120 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 PPIGQ13427 754 aaKnown RBP eCLIP4.37□□□□□ -1.71
MSL3-209ENST00000467141 PGM5Q15124 567 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 NECTIN1Q15223 517 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 STXBP2Q15833 593 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 SLC14A2Q15849 920 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 LY6KQ17RY6 165 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 TIGD5Q53EQ6 642 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 FAM47CQ5HY64 1035 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 ZFYVE27Q5T4F4 411 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 PSRC1Q6PGN9 363 aaPredicted RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 SEPT14Q6ZU15 432 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 TMC3Q7Z5M5 1100 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 FERMT3Q86UX7 667 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 MCF2L2Q86YR7 1114 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 ZNF654Q8IZM8 581 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 TMEM199Q8N511 208 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 ZNF655Q8N720 491 aaPredicted RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 NSUN6Q8TEA1 469 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 AFG1LQ8WV93 481 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 KAT2BQ92831 832 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 INTS4Q96HW7 963 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 IWS1Q96ST2 819 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 MPHOSPH6Q99547 160 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 PDCD2LQ9BRP1 358 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 MYL10Q9BUA6 226 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 NT5C1AQ9BXI3 368 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 SEZ6LQ9BYH1 1024 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 MKRN2Q9H000 416 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 SP110Q9HB58 689 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 IL23AQ9NPF7 189 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 DDX41Q9UJV9 622 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 FBXL21Q9UKT6 434 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 TCFL5Q9UL49 500 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 YBX2Q9Y2T7 364 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 MRPL11Q9Y3B7 192 aaKnown RBP4.37□□□□□ -1.71
MSL3-209ENST00000467141 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
MSL3-209ENST00000467141 TDRD15B5MCY1 1934 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 B4DLN1 442 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 HAS3O00219 553 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 KPNA6O60684 536 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 EIF3JO75822 258 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 DDAH1O94760 285 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 PRAMEF1O95521 474 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 F2P00734 622 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 SYPP08247 313 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 ZNF286BP0CG31 522 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 MYCLP12524 364 aaPredicted RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 NME1P15531 152 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 ZNF16P17020 682 aaPredicted RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 UBA1P22314 1058 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 ZNF76P36508 570 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 MRPL12P52815 198 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 MRPS9P82933 396 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 SP2Q02086 613 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 SNW1Q13573 536 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 GPNMBQ14956 572 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 SART3Q15020 963 aaKnown RBP4.36□□□□□ -1.71
MSL3-209ENST00000467141 HSDL1Q3SXM5 330 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 BMP2KLQ5H9B9 411 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 ARHGEF16Q5VV41 709 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 CREB3L3Q68CJ9 461 aa4.36□□□□□ -1.71
MSL3-209ENST00000467141 NFRKBQ6P4R8 1299 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms