RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 LTB4R2Q9NPC1 389 aa22.51■■□□□ 1.19
COL6A1-203ENST00000466285 SLC38A7Q9NVC3 462 aa22.51■■□□□ 1.19
COL6A1-203ENST00000466285 CEP72Q9P209 647 aa22.51■■□□□ 1.19
COL6A1-203ENST00000466285 TIMM13Q9Y5L4 95 aaPredicted RBP22.51■■□□□ 1.19
COL6A1-203ENST00000466285 PRRG1O14668 218 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 SYN3O14994 580 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 FAM189A1O60320 539 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 TOM1L1O75674 476 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 PLA2G4BP0C869 781 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 ATF2P15336 505 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 MCM4P33991 863 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 CTXN3Q4LDR2 81 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 TPRG1Q6ZUI0 275 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 APBB1IPQ7Z5R6 666 aaPredicted RBP22.5■■□□□ 1.19
COL6A1-203ENST00000466285 DDX12PQ92771 950 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 TMX3Q96JJ7 454 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 NTPCRQ9BSD7 190 aaKnown RBP22.5■■□□□ 1.19
COL6A1-203ENST00000466285 HEBP1Q9NRV9 189 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 NUB1Q9Y5A7 615 aa22.5■■□□□ 1.19
COL6A1-203ENST00000466285 SCN1AP35498 2009 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 LRG1P02750 347 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 GJB2P29033 226 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 MCL1Q07820 350 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 FAM78AQ5JUQ0 283 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 RNF19BQ6ZMZ0 732 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 TCEAL8Q8IYN2 117 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 DCLK2Q8N568 766 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 REEP2Q9BRK0 252 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 AVENQ9NQS1 362 aaPredicted RBP22.49■■□□□ 1.19
COL6A1-203ENST00000466285 RBM19Q9Y4C8 960 aaKnown RBP22.49■■□□□ 1.19
COL6A1-203ENST00000466285 CEP250Q9BV73 2442 aa22.49■■□□□ 1.19
COL6A1-203ENST00000466285 ECI2O75521 394 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 LMNAP02545 664 aaKnown RBP22.48■■□□□ 1.19
COL6A1-203ENST00000466285 CDR1P51861 262 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 NCKAP1LP55160 1127 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 ADCY1Q08828 1119 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 SLC39A4Q6P5W5 647 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 KCNG4Q8TDN1 519 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 IKZF4Q9H2S9 585 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 C17orf75Q9HAS0 396 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 STK24Q9Y6E0 443 aa22.48■■□□□ 1.19
COL6A1-203ENST00000466285 KIF26AQ9ULI4 1882 aaPredicted RBP22.47■■□□□ 1.19
COL6A1-203ENST00000466285 TTC26A0AVF1 554 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 FAM170BA6NMN3 283 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 TISP43B9A030 160 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 EIF5BO60841 1220 aaKnown RBP22.47■■□□□ 1.19
COL6A1-203ENST00000466285 PTPN2P17706 415 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 RPL9P32969 192 aaKnown RBP22.47■■□□□ 1.19
COL6A1-203ENST00000466285 PRKCQQ04759 706 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 TWF1Q12792 350 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 STRN3Q13033 797 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 FZD5Q13467 585 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 RILPL1Q5EBL4 403 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 ZNF280DQ6N043 979 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 TSSK4Q6SA08 328 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 TTC9BQ8N6N2 239 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 RSPRY1Q96DX4 576 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 PGLYRP2Q96PD5 576 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 BLOC1S4Q9NUP1 217 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 SPATA6Q9NWH7 488 aaPredicted RBP22.47■■□□□ 1.19
COL6A1-203ENST00000466285 PCDHB8Q9UN66 801 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 F5P12259 2224 aa22.47■■□□□ 1.19
COL6A1-203ENST00000466285 NUP210Q8TEM1 1887 aaPredicted RBP22.46■■□□□ 1.19
COL6A1-203ENST00000466285 DHX8Q14562 1220 aaKnown RBP22.46■■□□□ 1.19
COL6A1-203ENST00000466285 ZBTB6Q15916 424 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 ENOX2Q16206 610 aaKnown RBP22.46■■□□□ 1.19
COL6A1-203ENST00000466285 ZPBP2Q6X784 338 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 ZNF687Q8N1G0 1237 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 TMEM209Q96SK2 561 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 TIPINQ9BVW5 301 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 DNAJC25Q9H1X3 360 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 GDE1Q9NZC3 331 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 YIPF1Q9Y548 306 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 TCHHQ07283 1943 aa22.46■■□□□ 1.19
COL6A1-203ENST00000466285 LACTBL1A8MY62 500 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 H7C4K7 107 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 CPB1P15086 417 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 ELF1P32519 619 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 VIPR2P41587 438 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 RABEP1Q15276 862 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 STXBP5Q5T5C0 1151 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 VITQ6UXI7 678 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 RTL10Q7L3V2 364 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 HAUS6Q7Z4H7 955 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 GPBP1Q86WP2 473 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 KIAA2013Q8IYS2 634 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 SUMF1Q8NBK3 374 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 ELSPBP1Q96BH3 223 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 RMDN1Q96DB5 314 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 KIF12Q96FN5 646 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 SHDQ96IW2 340 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 ASB16Q96NS5 453 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 FIZ1Q96SL8 496 aa22.45■■□□□ 1.18
COL6A1-203ENST00000466285 M0QZQ0 153 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 SPTLC1O15269 473 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 CLDN3O15551 220 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 SOAT2O75908 522 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 MYL4P12829 197 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 LRPAP1P30533 357 aa22.44■■□□□ 1.18
COL6A1-203ENST00000466285 MATR3P43243 847 aaKnown RBP eCLIP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms