RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 ANKMY2Q8IV38 441 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 PGM2Q96G03 612 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 HSD17B14Q9BPX1 270 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 MED10Q9BTT4 135 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
CPNE6-202ENST00000460657 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 M0QYV0 167 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PYGMP11217 842 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 NFX1Q12986 1120 aaKnown RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SGSM1Q2NKQ1 1148 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 GBP5Q96PP8 586 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 KDM4CQ9H3R0 1056 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SLC38A10Q9HBR0 1119 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PSMC3IPQ9P2W1 217 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TXNDC9O14530 226 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 LPXNO60711 386 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 ARFIP2P53365 341 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 ROR1Q01973 937 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 CYP24A1Q07973 514 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PPP6R3Q5H9R7 873 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SYTL5Q8TDW5 730 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 ATG4CQ96DT6 458 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 WDR35Q9P2L0 1181 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TTLL3Q9Y4R7 772 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PCDHA3Q9Y5H8 950 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SYNJ2BP-COX16A0A087WUM0 186 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 RIPK2O43353 540 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TOM1L1O75674 476 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SKIP12755 728 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PHKA2P46019 1235 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 CLEC16AQ2KHT3 1053 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 SLC9A9Q8IVB4 645 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 C4orf33Q8N1A6 199 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 RNF149Q8NC42 400 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TARS2Q9BW92 718 aaKnown RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 COX16Q9P0S2 106 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 PRKCBP05771 671 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 FAM102AQ5T9C2 384 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 CRLF3Q8IUI8 442 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 CCNYQ8ND76 341 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 DEPDC1BQ8WUY9 529 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 DHX38Q92620 1227 aaKnown RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 CYTH2Q99418 400 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 WDR18Q9BV38 432 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TOPORSQ9NS56 1045 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-202ENST00000460657 TAS2R14Q9NYV8 317 aa12.74□□□□□ -0.37
CPNE6-202ENST00000460657 H0Y3Z8 333 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 AGPSO00116 658 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 TULP2O00295 520 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 PROSCO94903 275 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 SLC12A2P55011 1212 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 AGBL3Q8NEM8 1001 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 PPP1R16BQ96T49 567 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 TMEM51Q9NW97 253 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 LRP6O75581 1613 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 ZWINTO95229 277 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 GSTA1P08263 222 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 RARAP10276 462 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 RFC5P40937 340 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 YTHDF3Q7Z739 585 aaKnown RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 NOP9Q86U38 636 aaKnown RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 UBXN6Q9BZV1 441 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 SNX25Q9H3E2 840 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 PPFIA2O75334 1257 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 FSBPO95073 299 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 TTC4O95801 387 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 SDC4P31431 198 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 CDH6P55285 790 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 BCAR1P56945 870 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 ACTR2P61160 394 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 KRT35Q92764 455 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 ALKBH8Q96BT7 664 aaKnown RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 PDCD2LQ9BRP1 358 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
CPNE6-202ENST00000460657 PPARGC1AQ9UBK2 798 aaKnown RBP12.73□□□□□ -0.37
CPNE6-202ENST00000460657 C19orf81C9J6K1 198 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ASAP2O43150 1006 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 TRADDQ15628 312 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 WDR72Q3MJ13 1102 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 C2CD6Q53TS8 623 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 BZW1Q7L1Q6 419 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms