RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 HNRNPDLO14979 420 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 TBCAO75347 108 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 PLCG1P19174 1290 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 HOXA9P31269 272 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 XKR4Q5GH76 650 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 VARS2Q5ST30 1063 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 TSSK4Q6SA08 328 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 ALKAL1Q6UXT8 129 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 NXPE3Q969Y0 559 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 USP18Q9UMW8 372 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 SMG5Q9UPR3 1016 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 BACE2Q9Y5Z0 518 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 SPTBN2O15020 2390 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 DCDC2BA2VCK2 349 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 H7C4K7 107 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 PRRG1O14668 218 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 PAPLNO95428 1278 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 CXCL8P10145 99 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 PDCP20941 246 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 ELF1P32519 619 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 RPL9P32969 192 aaKnown RBP17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 LONP1P36776 959 aaKnown RBP17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 NCKAP1LP55160 1127 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 PPP2R3AQ06190 1150 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 UVSSAQ2YD98 709 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 CD300LGQ6UXG3 332 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 RSPO2Q6UXX9 243 aaPredicted RBP17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 HAUS6Q7Z4H7 955 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 KXD1Q9BQD3 176 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 BCO2Q9BYV7 579 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 TUBGCP4Q9UGJ1 667 aa17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 CDV3Q9UKY7 258 aaKnown RBP17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 ZFP37Q9Y6Q3 630 aaPredicted RBP17.17■□□□□ 0.34
CHCHD3-204ENST00000457942 KANSL1LA0AUZ9 987 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 SYN3O14994 580 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 LRG1P02750 347 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 ATXN1P54253 815 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 ROR1Q01973 937 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 GRIN1Q05586 938 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 SPAG1Q07617 926 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 MCL1Q07820 350 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 MCM6Q14566 821 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 MLF2Q15773 248 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 PABPC1LQ4VXU2 614 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 ARSHQ5FYA8 562 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 RAD54LQ92698 747 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 KIF12Q96FN5 646 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 HCFC1R1Q9NWW0 138 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 CDH7Q9ULB5 785 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 ACACBO00763 2458 aa17.16■□□□□ 0.34
CHCHD3-204ENST00000457942 SPTLC1O15269 473 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 CLTAP09496 248 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 KCNA4P22459 653 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 STARD6P59095 220 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 LPAL2Q16609 132 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 CTXN3Q4LDR2 81 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 ZNF280DQ6N043 979 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 APPL2Q8NEU8 664 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 ATRIPQ8WXE1 791 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 ING5Q8WYH8 240 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 LARP4BQ92615 738 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 FAM212AQ96EL1 285 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 SHDQ96IW2 340 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 CACNA1IQ9P0X4 2223 aa17.15■□□□□ 0.34
CHCHD3-204ENST00000457942 FAM170BA6NMN3 283 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 TRAK2O60296 914 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 TNFSF9P41273 254 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 KYAT1Q16773 422 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 MTSS1LQ765P7 747 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 ITFG1Q8TB96 612 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 FGF13Q92913 245 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 MSTO1Q9BUK6 570 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 RPF1Q9H9Y2 349 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 CYP4F11Q9HBI6 524 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 BLOC1S4Q9NUP1 217 aa17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 DNMT3BQ9UBC3 853 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 UBQLN1Q9UMX0 589 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 MRPS23Q9Y3D9 190 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 TPRP12270 2363 aaKnown RBP17.14■□□□□ 0.33
CHCHD3-204ENST00000457942 CHD8Q9HCK8 2581 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 WDR27A2RRH5 827 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 POU2F2P09086 479 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 CPB1P15086 417 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 SCP2P22307 547 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 TXLNAP40222 546 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 CEBPZQ03701 1054 aaKnown RBP17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 CUL4AQ13619 759 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 ST3GAL2Q16842 350 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 SLC8B1Q6J4K2 584 aa17.13■□□□□ 0.33
CHCHD3-204ENST00000457942 TPRG1Q6ZUI0 275 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms