RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LCORLQ8N3X6 602 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 DENND1AQ8TEH3 1009 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 TEKT1Q969V4 418 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 CALML4Q96GE6 196 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 ANKRD2Q9GZV1 360 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 DNAJC17Q9NVM6 304 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 SLAIN2Q9P270 581 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 DCTN4Q9UJW0 460 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 DMTF1Q9Y222 760 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 GNEQ9Y223 722 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 HEY1Q9Y5J3 304 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 ADAMTS7Q9UKP4 1686 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 COL22A1Q8NFW1 1626 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 ATAD5Q96QE3 1844 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 TP73O15350 636 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 AP1G1O43747 822 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 ADCY3O60266 1144 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 MAGEC1O60732 1142 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 CLPTM1O96005 669 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 SLC10A3P09131 477 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 OR52Z1P0C646 297 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 SMIM18P0DKX4 95 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 RARBP10826 455 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 HOXA7P31268 230 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 COILP38432 576 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 ACADVLP49748 655 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 ERFP50548 548 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 UBE4AQ14139 1066 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 LPIN1Q14693 890 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 C6orf163Q5TEZ5 329 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 Q6ZNX1 250 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 RIPOR1Q6ZS17 1223 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 NET1Q7Z628 596 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 SYT2Q8N9I0 419 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 TTLL11Q8NHH1 800 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 PRPF31Q8WWY3 499 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 CCDC85AQ96PX6 553 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 RBM38Q9H0Z9 239 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 WHRNQ9P202 907 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 PPM1HQ9ULR3 514 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
LSM5-208ENST00000450169 TELO2Q9Y4R8 837 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 KIF13BQ9NQT8 1826 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 IGSF9BQ9UPX0 1349 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 MINDY4BA8MYZ0 360 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 C6orf229H3BNL8 230 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PRPF4O43172 522 aaKnown RBP eCLIP9.11□□□□□ -0.95
LSM5-208ENST00000450169 CBFA2T3O75081 653 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CIB2O75838 187 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 GGPS1O95749 300 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TMEM253P0C7T8 217 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 VCLP18206 1134 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 SLC9A1P19634 815 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ABCB4P21439 1286 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ACTR3P61158 418 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ITGA7Q13683 1181 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 SPIDRQ14159 915 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PDK3Q15120 406 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CLPPQ16740 277 aaPredicted RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 ZNF362Q5T0B9 420 aaPredicted RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 BRINP3Q76B58 766 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PASD1Q8IV76 773 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CROCCP3Q8IVE0 287 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ZDHHC14Q8IZN3 488 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 GPKOWQ92917 476 aaPredicted RBP eCLIP9.11□□□□□ -0.95
LSM5-208ENST00000450169 SNX27Q96L92 541 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TTC25Q96NG3 672 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CCDC77Q9BR77 488 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 OSBPL8Q9BZF1 889 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 EURLQ9NYK6 297 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 NINJ2Q9NZG7 142 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 KANSL3Q9P2N6 904 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ANKFY1Q9P2R3 1169 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 HEY2Q9UBP5 337 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CROTQ9UKG9 612 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 FAF1Q9UNN5 650 aaPredicted RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 FADS3Q9Y5Q0 445 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 C15orf38-AP3S2A0A0A6YYH1 394 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 A0A0G2JND7 137 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ARHGAP10A1A4S6 786 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TMEM110-MUSTN1A8MSY1 372 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TFAP2AP05549 437 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 COL6A2P12110 1019 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PCSK6P29122 969 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TECP42680 631 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PHKA1P46020 1223 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 SLC18A1P54219 525 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PPIDQ08752 370 aaKnown RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 DLG1Q12959 904 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 NR1H3Q13133 447 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 RASGRF1Q13972 1273 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms