RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 AGAP1Q9UPQ3 857 aa12.79□□□□□ -0.36
RCL1-208ENST00000448872 GOLGA6L19H0YKK7 550 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 I3L4J1 428 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 PIRO00625 290 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 XPOTO43592 962 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 PHACTR2O75167 634 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 B3GAT3O94766 335 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 AFPP02771 609 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 ALDH2P05091 517 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 LAG3P18627 525 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 GTF2H1P32780 548 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 FMO5P49326 533 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 MXI1P50539 228 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 MYL6P60660 151 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 SMAD3P84022 425 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 MYL7Q01449 175 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 RAB30Q15771 203 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 KRT39Q6A163 491 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 MICAL3Q7RTP6 2002 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 USP37Q86T82 979 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 TIFAQ96CG3 184 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 ITGA11Q9UKX5 1188 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 FAN1Q9Y2M0 1017 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 TTC3P53804 2025 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 CHD7Q9P2D1 2997 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 A0A1W2PPC1 479 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 HLA-DRAP01903 254 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 CTNNB1P35222 781 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 PIK3CAP42336 1068 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 BRCC3P46736 316 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 COPB1P53618 953 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 AP3M2P53677 418 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 RBP5P82980 135 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 APBA1Q02410 837 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 NCOA4Q13772 614 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 LRIT3Q3SXY7 679 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 SPOPLQ6IQ16 392 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 DCLRE1AQ6PJP8 1040 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 TAS1R1Q7RTX1 841 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
RCL1-208ENST00000448872 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 UROC1Q96N76 676 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
RCL1-208ENST00000448872 CDH23Q9H251 3354 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 EPOPA6NHQ4 379 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 STX10O60499 249 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 CSPG5O95196 566 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 BMPR1AP36894 532 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 TRPC3Q13507 836 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 IGSF21Q96ID5 467 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 HPDLQ96IR7 371 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.37
RCL1-208ENST00000448872 COLEC11Q9BWP8 271 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 GPR62Q9BZJ7 368 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 SLC28A3Q9HAS3 691 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
RCL1-208ENST00000448872 RAB20Q9NX57 234 aa12.77□□□□□ -0.37
RCL1-208ENST00000448872 PTPRSQ13332 1948 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 RFXAPO00287 272 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 AP5Z1O43299 807 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 TADA2AO75478 443 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 FGF18O76093 207 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 CLSTN1O94985 981 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 LILRA4P59901 499 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 ERVK-21P61565 698 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 TPM4P67936 248 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 FANCCQ00597 558 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 LRMPQ12912 555 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 FBXL13Q8NEE6 735 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 LMO3Q8TAP4 145 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
RCL1-208ENST00000448872 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
RCL1-208ENST00000448872 AAASQ9NRG9 546 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 SPG21Q9NZD8 308 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 POLIQ9UNA4 740 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 NUB1Q9Y5A7 615 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
RCL1-208ENST00000448872 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
RCL1-208ENST00000448872 LGALS16A8MUM7 142 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 TEX33O43247 280 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms